Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2022

Experiment: BG11 with Polymyxin B sulfate 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Polymyxin B sulfate 0.000390625 mg/ml
2,090,143	-		Synpcc7942_2021	0.19	-1.0
2,090,347	+		Synpcc7942_2021	0.88	-1.0
2,090,361	+				-1.1
2,090,361	+				+0.8
2,090,375	+				-0.0
2,090,397	+				-0.8
2,090,405	-				-0.6
2,090,424	+				-4.1
2,090,432	-				-0.0
2,090,448	+				-0.6
2,090,468	-				+1.1
2,090,478	+				-1.3
2,090,535	+	nusA	Synpcc7942_2022	0.12	-3.5
2,090,543	-	nusA	Synpcc7942_2022	0.12	-1.6
2,091,699	+				-2.8
2,091,712	+				-0.0
2,092,013	+		Synpcc7942_2023	0.55	-2.8
2,092,018	+		Synpcc7942_2023	0.56	-2.1
2,092,160	-		Synpcc7942_2023	0.87	-0.8
2,092,375	+				-2.3
2,092,375	+				-3.8
2,092,385	+				-2.1
2,092,436	-				-1.5
2,092,454	-				+0.2
2,092,469	-				-2.5
2,092,537	+		Synpcc7942_2024	0.17	-0.2
2,092,537	+		Synpcc7942_2024	0.17	+0.9
2,092,545	-		Synpcc7942_2024	0.18	-2.6
2,092,580	+		Synpcc7942_2024	0.22	+0.9
2,092,585	+		Synpcc7942_2024	0.23	-1.6
2,092,616	+		Synpcc7942_2024	0.26	-0.2
2,092,636	-		Synpcc7942_2024	0.29	+0.6
2,092,637	-		Synpcc7942_2024	0.29	-1.5
2,092,637	-		Synpcc7942_2024	0.29	-1.5
2,092,643	-		Synpcc7942_2024	0.29	+0.8
2,092,660	-		Synpcc7942_2024	0.31	+1.4
2,092,660	-		Synpcc7942_2024	0.31	-0.5
2,092,683	-		Synpcc7942_2024	0.34	+0.6