Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2020

Experiment: BG11 with Polymyxin B sulfate 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Polymyxin B sulfate 0.000390625 mg/ml
2,085,852	-				+0.4
2,085,883	+				-0.8
2,085,885	-				-0.6
2,085,899	-				+1.2
2,085,907	+				-0.5
2,085,913	-				+0.8
2,085,913	-				+0.3
2,086,026	+		Synpcc7942_2019	0.15	-0.0
2,086,026	+				+1.0
2,086,155	-		Synpcc7942_2019	0.30	-1.3
2,086,184	+		Synpcc7942_2019	0.33	-0.2
2,086,184	+		Synpcc7942_2019	0.33	-1.2
2,086,192	-		Synpcc7942_2019	0.34	-0.0
2,086,231	-		Synpcc7942_2019	0.39	+1.4
2,086,252	-		Synpcc7942_2019	0.41	+0.5
2,086,273	+		Synpcc7942_2019	0.44	-0.5
2,086,273	+		Synpcc7942_2019	0.44	+0.8
2,086,301	+		Synpcc7942_2019	0.47	-1.5
2,086,438	+		Synpcc7942_2019	0.63	-0.3
2,086,517	-		Synpcc7942_2019	0.72	-1.5
2,086,527	+		Synpcc7942_2019	0.73	-2.3
2,086,585	-		Synpcc7942_2019	0.80	-1.2
2,086,590	-		Synpcc7942_2019	0.80	+0.4
2,086,594	+		Synpcc7942_2019	0.81	-2.3
2,086,697	-				-1.3
2,086,775	+				-0.8
2,086,783	-				-0.8
2,086,840	+				-0.3
2,086,842	+				+0.8
2,086,882	-				+1.5
2,090,143	-		Synpcc7942_2021	0.19	-1.0
2,090,347	+		Synpcc7942_2021	0.88	-1.0
2,090,361	+				-1.1
2,090,361	+				+0.8
2,090,375	+				-0.0
2,090,397	+				-0.8
2,090,405	-				-0.6
2,090,424	+				-4.1
2,090,432	-				-0.0
2,090,448	+				-0.6
2,090,468	-				+1.1
2,090,478	+				-1.3
2,090,535	+	nusA	Synpcc7942_2022	0.12	-3.5
2,090,543	-	nusA	Synpcc7942_2022	0.12	-1.6