Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1858

Experiment: BG11 with Polymyxin B sulfate 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Polymyxin B sulfate 0.000390625 mg/ml
1,925,901	-				+0.4
1,925,937	-	mmsB	Synpcc7942_1857	0.12	+0.2
1,925,944	+	mmsB	Synpcc7942_1857	0.13	-1.6
1,925,960	-	mmsB	Synpcc7942_1857	0.14	-0.4
1,925,968	-	mmsB	Synpcc7942_1857	0.15	-0.4
1,926,034	+	mmsB	Synpcc7942_1857	0.23	+0.1
1,926,074	-	mmsB	Synpcc7942_1857	0.28	+0.0
1,926,108	+	mmsB	Synpcc7942_1857	0.31	-1.5
1,926,121	+	mmsB	Synpcc7942_1857	0.33	+1.1
1,926,130	+	mmsB	Synpcc7942_1857	0.34	+0.6
1,926,140	+	mmsB	Synpcc7942_1857	0.35	-0.8
1,926,172	-	mmsB	Synpcc7942_1857	0.39	-0.6
1,926,214	+	mmsB	Synpcc7942_1857	0.44	-0.8
1,926,217	-	mmsB	Synpcc7942_1857	0.44	+0.3
1,926,231	-	mmsB	Synpcc7942_1857	0.46	-0.2
1,926,238	+	mmsB	Synpcc7942_1857	0.46	-1.5
1,926,244	+	mmsB	Synpcc7942_1857	0.47	-1.0
1,926,252	-	mmsB	Synpcc7942_1857	0.48	-1.7
1,926,252	-	mmsB	Synpcc7942_1857	0.48	-0.4
1,926,255	+	mmsB	Synpcc7942_1857	0.48	-0.8
1,926,270	+	mmsB	Synpcc7942_1857	0.50	+0.7
1,926,275	+	mmsB	Synpcc7942_1857	0.51	+1.8
1,926,275	+	mmsB	Synpcc7942_1857	0.51	+0.3
1,926,284	-	mmsB	Synpcc7942_1857	0.52	+0.4
1,926,284	-	mmsB	Synpcc7942_1857	0.52	+0.4
1,926,293	-	mmsB	Synpcc7942_1857	0.53	+0.3
1,926,298	-	mmsB	Synpcc7942_1857	0.53	-1.3
1,926,298	-	mmsB	Synpcc7942_1857	0.53	-0.4
1,926,303	-				-0.0
1,926,314	+	mmsB	Synpcc7942_1857	0.55	+0.6
1,926,314	-	mmsB	Synpcc7942_1857	0.55	+0.6
1,926,350	-	mmsB	Synpcc7942_1857	0.59	-1.4
1,926,350	-	mmsB	Synpcc7942_1857	0.59	+0.2
1,926,350	-	mmsB	Synpcc7942_1857	0.59	+1.0
1,926,355	-	mmsB	Synpcc7942_1857	0.60	-0.1
1,926,366	-	mmsB	Synpcc7942_1857	0.61	-0.3
1,926,405	+	mmsB	Synpcc7942_1857	0.66	-0.7
1,926,413	-	mmsB	Synpcc7942_1857	0.67	+0.2
1,926,413	-	mmsB	Synpcc7942_1857	0.67	+0.7
1,926,429	+				-0.0
1,926,429	+	mmsB	Synpcc7942_1857	0.69	+1.7
1,926,480	-	mmsB	Synpcc7942_1857	0.74	-1.5
1,926,482	-	mmsB	Synpcc7942_1857	0.75	+1.0
1,926,497	+	mmsB	Synpcc7942_1857	0.76	-1.5
1,926,502	+	mmsB	Synpcc7942_1857	0.77	+1.0
1,926,510	+	mmsB	Synpcc7942_1857	0.78	-0.5
1,926,510	+	mmsB	Synpcc7942_1857	0.78	-2.1
1,926,518	+	mmsB	Synpcc7942_1857	0.79	-0.5
1,926,518	-	mmsB	Synpcc7942_1857	0.79	-0.7
1,926,518	-	mmsB	Synpcc7942_1857	0.79	+0.6
1,926,518	-	mmsB	Synpcc7942_1857	0.79	-1.7
1,926,518	-	mmsB	Synpcc7942_1857	0.79	-1.9
1,926,583	+	mmsB	Synpcc7942_1857	0.86	+0.3
1,926,583	+	mmsB	Synpcc7942_1857	0.86	+0.6
1,926,599	+	mmsB	Synpcc7942_1857	0.88	+1.1
1,926,640	-				-1.0
1,926,672	-				+1.8
1,926,683	-				+0.4
1,926,706	-				+1.5
1,927,679	+				+0.3
1,927,679	+				-4.5
1,927,687	-				+1.2
1,927,687	-				-0.2
1,927,725	+				-0.6
1,927,733	-				-1.7
1,927,740	+				+0.4
1,927,752	+				-0.4
1,927,815	-				+0.3
1,927,815	-				-0.7
1,927,815	-				+0.0
1,927,842	-				+0.5
1,927,855	-				-3.3
1,927,864	+				-0.0
1,927,864	+				-2.7
1,927,881	-				+0.4
1,927,881	-				-0.5
1,927,889	+				-0.4
1,927,907	-				+0.0
1,927,965	-				+0.7
1,927,980	-				+0.2
1,928,022	-		Synpcc7942_1859	0.10	-1.3
1,928,031	+		Synpcc7942_1859	0.11	-2.1
1,928,076	-		Synpcc7942_1859	0.12	+0.3
1,928,076	-		Synpcc7942_1859	0.12	-0.2
1,928,159	-		Synpcc7942_1859	0.15	-0.0
1,928,159	-		Synpcc7942_1859	0.15	-3.2
1,928,225	+		Synpcc7942_1859	0.18	+0.4
1,928,300	+		Synpcc7942_1859	0.21	-0.7
1,928,306	-		Synpcc7942_1859	0.21	-0.6
1,928,307	-		Synpcc7942_1859	0.21	-0.0
1,928,307	-		Synpcc7942_1859	0.21	-1.2
1,928,308	-		Synpcc7942_1859	0.21	+0.3
1,928,408	-		Synpcc7942_1859	0.25	-0.2
1,928,424	+		Synpcc7942_1859	0.25	-1.5
1,928,431	+		Synpcc7942_1859	0.25	+0.8
1,928,573	-		Synpcc7942_1859	0.31	-1.2
1,928,573	-				-0.6
1,928,573	-		Synpcc7942_1859	0.31	-2.3
1,928,592	-		Synpcc7942_1859	0.31	+0.6