Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1120

Experiment: BG11 with Polymyxin B sulfate 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Polymyxin B sulfate 0.000390625 mg/ml
1,136,864	-		Synpcc7942_1119	0.36	+0.1
1,136,871	-		Synpcc7942_1119	0.37	-1.1
1,136,881	-		Synpcc7942_1119	0.39	+0.2
1,136,915	-		Synpcc7942_1119	0.44	-0.4
1,136,917	-		Synpcc7942_1119	0.44	-0.7
1,136,945	+		Synpcc7942_1119	0.48	-1.6
1,136,953	-		Synpcc7942_1119	0.50	-0.3
1,136,960	-		Synpcc7942_1119	0.51	-0.2
1,137,005	+		Synpcc7942_1119	0.57	-0.4
1,137,013	-		Synpcc7942_1119	0.58	-0.7
1,137,013	-		Synpcc7942_1119	0.58	-0.2
1,137,059	-		Synpcc7942_1119	0.65	-0.0
1,137,059	-		Synpcc7942_1119	0.65	+0.4
1,137,071	+		Synpcc7942_1119	0.67	-0.7
1,137,073	+		Synpcc7942_1119	0.67	+0.5
1,137,129	-		Synpcc7942_1119	0.76	+0.4
1,137,204	+		Synpcc7942_1119	0.87	+0.5
1,137,214	+		Synpcc7942_1119	0.88	+0.0
1,137,264	-				-2.1
1,137,278	+				+2.0
1,137,283	+				-0.0
1,137,299	-				-0.7
1,137,299	-				+0.1
1,137,313	-				-1.2
1,137,328	+				-0.0
1,137,336	-				-0.4
1,137,343	-				-0.2
1,137,383	+				+0.2
1,137,383	+				-1.2
1,137,384	-				+0.7
1,137,391	-				+0.1
1,137,391	-				-0.6
1,137,464	+				+0.5
1,137,464	+				-0.6
1,137,464	+				-0.3
1,137,472	-				+0.7
1,137,499	+				-0.2
1,137,519	-				+0.0
1,137,519	-				+1.0
1,137,519	-				+1.2
1,137,547	+				+0.4
1,137,571	+				+0.2
1,137,599	+				+0.1
1,137,614	-				+0.7
1,137,614	-				-0.5
1,137,625	+				-3.2
1,137,633	-				-1.2
1,137,639	+				+1.6
1,137,647	-				-0.4
1,137,647	-				-0.2
1,137,647	-				-1.0
1,137,652	-				+0.2
1,137,698	+				+1.3
1,137,709	-				-0.6
1,137,711	+				+0.4
1,137,711	+				-1.0
1,137,719	-				+1.0
1,137,730	+				+0.3
1,137,733	-				-1.7
1,137,733	-				+0.8
1,137,733	-				-0.3
1,137,733	-				+0.4
1,137,733	-				-1.4
1,137,763	+				+1.4
1,137,817	+				+1.1
1,137,818	+				+0.0
1,137,831	-				+1.7
1,137,857	+				-0.1
1,137,865	-				-0.9
1,137,866	-				+6.7
1,137,887	+		Synpcc7942_1120	0.17	-0.9
1,137,887	+		Synpcc7942_1120	0.17	+1.4
1,137,895	-		Synpcc7942_1120	0.22	+0.5
1,137,895	-		Synpcc7942_1120	0.22	-1.0
1,137,974	+		Synpcc7942_1120	0.73	-0.5
1,137,989	-		Synpcc7942_1120	0.83	+0.1
1,138,010	+				-1.1
1,138,098	+				-0.0
1,138,131	+				+0.3
1,138,140	+				-0.6
1,138,140	+				-0.5
1,138,140	+				-0.9
1,138,148	-				+1.2
1,138,148	-				-1.5
1,138,149	+				-0.2
1,138,151	-				-0.7
1,138,163	+				+0.6
1,138,163	+				-1.2
1,138,163	+				+1.4
1,138,171	+				+0.5
1,138,176	+				-0.4
1,138,195	+				-0.9
1,138,195	+				-0.5
1,138,203	-				+2.0
1,138,211	+				+0.0
1,138,211	+				+0.0
1,138,217	-				-2.0
1,138,219	+				+0.3
1,138,219	-				-1.6
1,138,224	+				-0.7
1,138,249	+				-1.0
1,138,255	+				-0.0
1,138,266	+				-0.9
1,138,269	-				+0.1
1,138,269	-				-0.9
1,138,284	+				+0.6
1,138,302	+				-0.5
1,138,302	+				+0.4
1,138,302	+				-0.6
1,138,333	+				-0.0
1,138,346	-				-0.4
1,138,360	-				-1.1
1,138,362	+				-0.7
1,138,370	-				+0.4
1,138,381	+				-0.9
1,138,384	+				-1.0
1,138,392	-				+0.1
1,138,410	+				-0.2
1,138,412	-				-0.9
1,138,415	-				+1.1
1,138,417	+				-0.3
1,138,433	+				-1.0
1,138,441	-				+0.0
1,138,441	-				-2.3
1,138,442	+				+1.1
1,138,442	+				+0.4
1,138,446	-				+1.6
1,138,450	-				-0.1
1,138,462	+				+0.0
1,138,462	+				-0.0
1,138,462	+				-0.4
1,138,470	-				-1.3
1,138,472	+				+0.4
1,138,472	+				+0.4
1,138,507	-				-0.8
1,138,509	+				-2.5
1,138,517	-				-1.0
1,138,517	-				-1.6
1,138,519	+				-2.1
1,138,524	+				+1.0
1,138,544	+				-0.6
1,138,546	-				-1.2
1,138,577	+				-1.5
1,138,612	+				-3.0
1,138,620	-				+0.2
1,138,654	-				-2.1
1,138,672	+				-3.0
1,138,680	-		Synpcc7942_1121	0.10	+1.4
1,138,732	+		Synpcc7942_1121	0.12	-0.0
1,138,732	+		Synpcc7942_1121	0.12	-2.2
1,138,739	+		Synpcc7942_1121	0.13	-1.0
1,138,762	-		Synpcc7942_1121	0.14	-1.0
1,138,767	-		Synpcc7942_1121	0.14	-0.4
1,138,783	+		Synpcc7942_1121	0.15	+0.6
1,138,786	+		Synpcc7942_1121	0.15	+1.0
1,138,854	+		Synpcc7942_1121	0.18	-0.0
1,138,900	+		Synpcc7942_1121	0.20	-0.6
1,138,907	+		Synpcc7942_1121	0.21	+1.0
1,138,908	-		Synpcc7942_1121	0.21	-1.7
1,138,931	+		Synpcc7942_1121	0.22	-2.7
1,138,939	-		Synpcc7942_1121	0.22	-3.4
1,138,939	-		Synpcc7942_1121	0.22	-1.4
1,138,949	-		Synpcc7942_1121	0.22	-0.0
1,138,964	-		Synpcc7942_1121	0.23	-4.3