Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37460

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,881,796	+				+0.8
3,881,796	+				-1.8
3,881,796	+				-1.5
3,881,797	-				-0.8
3,882,046	-		RR42_RS37455	0.67	-1.0
3,882,210	-				-1.0
3,882,210	-				+0.0
3,882,252	+				-0.1
3,882,252	+				-1.0
3,882,252	+				+0.3
3,882,253	-				-1.5
3,882,253	-				-0.0
3,882,253	-				-1.6
3,882,517	+				-1.3
3,882,517	+				-1.0
3,882,518	-				+1.1
3,882,518	-				-0.3
3,882,589	+				-2.3
3,882,650	+				-0.9
3,882,650	+				+1.6
3,882,650	+				-0.9
3,882,651	-				-2.0
3,882,651	-				+0.4
3,882,651	-				+0.7
3,883,001	+		RR42_RS37460	0.28	+0.3
3,883,002	-		RR42_RS37460	0.28	-1.6
3,883,157	-		RR42_RS37460	0.40	+0.3
3,883,246	+		RR42_RS37460	0.47	-2.0
3,883,246	+		RR42_RS37460	0.47	-0.7
3,883,247	-		RR42_RS37460	0.47	+2.2
3,883,370	-		RR42_RS37460	0.57	+0.9
3,883,370	-		RR42_RS37460	0.57	+1.1
3,883,393	+		RR42_RS37460	0.59	+0.5
3,883,768	+		RR42_RS37460	0.89	-1.2
3,883,768	+		RR42_RS37460	0.89	+0.2
3,883,768	+		RR42_RS37460	0.89	-0.0
3,883,782	+				+0.5
3,883,782	+				-0.7
3,883,794	-				-1.1
3,883,957	+				-0.1
3,884,031	+				-1.1
3,884,032	-				+0.3
3,884,032	-				+0.0
3,884,032	-				+1.3
3,884,032	-				-2.1
3,884,356	-				-0.1
3,884,356	-				-0.5
3,884,473	-		RR42_RS37465	0.11	-0.7
3,884,473	-		RR42_RS37465	0.11	+0.5
3,884,621	+		RR42_RS37465	0.27	-0.2
3,884,715	+		RR42_RS37465	0.38	-1.5
3,884,715	+		RR42_RS37465	0.38	+1.4
3,884,715	+		RR42_RS37465	0.38	+1.0
3,884,716	-		RR42_RS37465	0.38	-3.0
3,884,762	-		RR42_RS37465	0.43	+0.8
3,884,762	-		RR42_RS37465	0.43	-1.3
3,884,787	-		RR42_RS37465	0.46	+0.6
3,884,787	-		RR42_RS37465	0.46	+1.9
3,884,787	-		RR42_RS37465	0.46	-1.0
3,884,787	-		RR42_RS37465	0.46	-0.6