Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37010

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,758,177	+				+0.5
3,758,177	+				-0.7
3,758,178	-				+0.5
3,758,178	-				+0.9
3,758,179	+				-2.1
3,758,201	-				+0.2
3,758,248	+				-0.1
3,758,249	-				-1.8
3,758,302	+				+0.6
3,758,303	-				+0.3
3,758,609	+		RR42_RS37005	0.43	+1.4
3,758,609	+		RR42_RS37005	0.43	+0.5
3,758,610	-		RR42_RS37005	0.44	-0.0
3,759,095	+				-0.5
3,759,339	+		RR42_RS37010	0.21	+1.0
3,759,339	+		RR42_RS37010	0.21	+0.9
3,759,339	+		RR42_RS37010	0.21	+0.4
3,759,339	+		RR42_RS37010	0.21	+0.8
3,759,339	+		RR42_RS37010	0.21	-0.1
3,759,339	+		RR42_RS37010	0.21	-0.4
3,759,339	+		RR42_RS37010	0.21	-2.0
3,759,340	-		RR42_RS37010	0.21	-0.7
3,759,340	-		RR42_RS37010	0.21	-3.2
3,759,344	+		RR42_RS37010	0.22	-0.7
3,759,344	+		RR42_RS37010	0.22	-3.1
3,759,344	+		RR42_RS37010	0.22	+0.0
3,759,345	-		RR42_RS37010	0.22	-2.8
3,759,345	-		RR42_RS37010	0.22	-1.7
3,759,425	+		RR42_RS37010	0.30	+0.1
3,759,504	-		RR42_RS37010	0.37	-1.1
3,759,504	-		RR42_RS37010	0.37	-0.2
3,759,506	+		RR42_RS37010	0.37	+0.3
3,759,506	+		RR42_RS37010	0.37	-0.3
3,759,507	-		RR42_RS37010	0.37	-0.3
3,759,552	-		RR42_RS37010	0.42	-2.0
3,759,666	+		RR42_RS37010	0.52	-0.5
3,759,666	+		RR42_RS37010	0.52	+0.3
3,759,667	+		RR42_RS37010	0.52	-1.8
3,759,667	-		RR42_RS37010	0.52	-0.4
3,759,929	+		RR42_RS37010	0.77	+0.1
3,759,930	-		RR42_RS37010	0.77	-2.5
3,760,046	+		RR42_RS37010	0.88	+1.0
3,760,047	-		RR42_RS37010	0.88	-2.5
3,760,167	-				-1.8
3,760,167	-				+0.3
3,760,167	-				-1.6
3,760,167	-				+0.4
3,760,167	-				-0.8
3,760,692	-		RR42_RS37015	0.38	-1.3
3,760,692	-		RR42_RS37015	0.38	-1.0
3,760,701	-		RR42_RS37015	0.39	-1.9
3,760,887	-		RR42_RS37015	0.54	-0.4
3,760,887	-		RR42_RS37015	0.54	+0.1
3,760,887	-		RR42_RS37015	0.54	+2.0
3,761,027	+		RR42_RS37015	0.65	+1.3
3,761,027	+		RR42_RS37015	0.65	-0.7
3,761,027	+		RR42_RS37015	0.65	-0.5
3,761,028	-		RR42_RS37015	0.65	-0.5
3,761,094	-		RR42_RS37015	0.70	+1.8
3,761,094	-		RR42_RS37015	0.70	-0.3
3,761,094	-		RR42_RS37015	0.70	-1.1
3,761,136	-		RR42_RS37015	0.73	-1.3
3,761,136	-				-1.0