Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36475

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,637,059	+		RR42_RS36470	0.38	-0.3
3,637,089	+		RR42_RS36470	0.40	-0.6
3,637,089	+		RR42_RS36470	0.40	+0.9
3,637,089	+		RR42_RS36470	0.40	-2.8
3,637,090	-		RR42_RS36470	0.40	-3.3
3,637,090	-		RR42_RS36470	0.40	+0.4
3,637,090	-		RR42_RS36470	0.40	-1.4
3,637,311	+		RR42_RS36470	0.56	+0.1
3,637,312	-		RR42_RS36470	0.56	-0.5
3,637,471	-		RR42_RS36470	0.67	+1.4
3,637,478	-		RR42_RS36470	0.68	-0.1
3,637,478	-		RR42_RS36470	0.68	-0.2
3,637,503	+		RR42_RS36470	0.70	+0.1
3,637,668	+		RR42_RS36470	0.82	+0.8
3,637,669	-		RR42_RS36470	0.82	+0.5
3,637,821	+				-0.1
3,637,822	-				+0.6
3,637,822	-				+0.2
3,637,822	-				-0.1
3,637,822	-				-0.2
3,637,976	-				+0.9
3,637,976	-				+0.6
3,638,003	-				+0.8
3,638,003	-				+1.4
3,638,179	+		RR42_RS36475	0.16	+0.9
3,638,179	+		RR42_RS36475	0.16	+0.4
3,638,407	+		RR42_RS36475	0.31	+0.3
3,638,474	-		RR42_RS36475	0.35	+0.3
3,638,491	+		RR42_RS36475	0.36	+1.1
3,638,492	-		RR42_RS36475	0.36	-0.3
3,638,519	-		RR42_RS36475	0.38	+0.3
3,638,584	+		RR42_RS36475	0.43	-0.5
3,638,584	+		RR42_RS36475	0.43	-1.6
3,638,585	-		RR42_RS36475	0.43	-0.8
3,638,585	-		RR42_RS36475	0.43	-3.1
3,638,587	-		RR42_RS36475	0.43	-0.5
3,638,587	-		RR42_RS36475	0.43	-0.0
3,638,606	-		RR42_RS36475	0.44	+0.1
3,638,606	-		RR42_RS36475	0.44	+0.6
3,638,665	+		RR42_RS36475	0.48	+0.0
3,638,744	-		RR42_RS36475	0.53	+0.0
3,639,022	-		RR42_RS36475	0.71	-0.8
3,639,025	+		RR42_RS36475	0.71	-1.8
3,639,026	-		RR42_RS36475	0.71	+0.2
3,639,026	-		RR42_RS36475	0.71	+1.4
3,639,088	+		RR42_RS36475	0.76	-2.1
3,639,088	+		RR42_RS36475	0.76	+1.2
3,639,175	+		RR42_RS36475	0.81	+0.4
3,639,176	-		RR42_RS36475	0.81	+1.0
3,639,239	-		RR42_RS36475	0.85	-0.8
3,639,313	+				-1.6
3,639,314	-				+0.4
3,639,321	+				+0.1
3,639,321	+				+0.2
3,639,321	+				+0.7
3,639,322	-				-0.4
3,639,322	-				+0.7
3,639,322	-				+0.2
3,639,338	+				-2.6
3,639,454	+				+0.1
3,639,454	+				+0.9
3,639,454	+				-2.9
3,639,454	+				-1.1
3,639,455	-				+0.0
3,639,455	-				+0.3
3,639,455	-				-2.3
3,639,455	-				+0.7
3,639,463	+				-0.8
3,639,463	+				+0.0
3,639,487	+				+0.1
3,639,608	+				+0.2
3,639,608	+				+0.1
3,639,608	+				+0.4
3,639,674	+				-1.8
3,639,674	+				+0.0
3,639,674	+				+0.2
3,639,674	+				-0.8
3,639,720	-		RR42_RS36480	0.13	-1.3
3,639,725	+		RR42_RS36480	0.13	+0.7
3,639,725	+		RR42_RS36480	0.13	-3.5
3,639,726	-		RR42_RS36480	0.14	+0.0
3,639,726	-		RR42_RS36480	0.14	+1.0
3,639,726	-		RR42_RS36480	0.14	+0.4
3,639,821	+		RR42_RS36480	0.21	+0.4
3,639,821	+		RR42_RS36480	0.21	-0.3
3,639,822	-		RR42_RS36480	0.21	+0.6
3,639,822	-		RR42_RS36480	0.21	-1.0
3,639,826	-		RR42_RS36480	0.21	-1.1
3,639,826	-		RR42_RS36480	0.21	+0.6
3,639,826	-		RR42_RS36480	0.21	+0.3
3,639,889	+		RR42_RS36480	0.26	-0.9
3,639,897	+		RR42_RS36480	0.27	+1.4
3,639,990	-		RR42_RS36480	0.34	+0.7
3,639,990	-		RR42_RS36480	0.34	+0.0
3,640,226	+		RR42_RS36480	0.53	+0.2
3,640,256	+		RR42_RS36480	0.55	+1.4
3,640,257	-		RR42_RS36480	0.55	+0.4