Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36240

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,578,659	+				+0.7
3,578,722	+				-2.1
3,578,722	+				+0.6
3,578,782	+				+0.4
3,578,782	+				-2.1
3,578,887	-		RR42_RS36235	0.15	-1.0
3,578,956	+		RR42_RS36235	0.24	-1.3
3,579,069	+		RR42_RS36235	0.38	+0.2
3,579,272	+		RR42_RS36235	0.63	-1.8
3,579,310	-		RR42_RS36235	0.68	-1.5
3,579,310	-		RR42_RS36235	0.68	+1.6
3,579,310	-		RR42_RS36235	0.68	-0.8
3,579,412	-		RR42_RS36235	0.81	-0.5
3,579,412	-		RR42_RS36235	0.81	+1.8
3,579,859	+		RR42_RS36240	0.20	+1.1
3,579,866	+		RR42_RS36240	0.21	-1.6
3,579,936	+		RR42_RS36240	0.26	-1.0
3,579,937	-		RR42_RS36240	0.26	+0.1
3,579,937	-		RR42_RS36240	0.26	-1.0
3,579,971	+		RR42_RS36240	0.28	+2.0
3,579,971	+		RR42_RS36240	0.28	-1.0
3,579,971	+		RR42_RS36240	0.28	+0.0
3,579,972	-		RR42_RS36240	0.28	-0.5
3,579,978	-		RR42_RS36240	0.28	-1.5
3,579,978	-		RR42_RS36240	0.28	-0.9
3,579,978	-		RR42_RS36240	0.28	-1.3
3,579,978	-		RR42_RS36240	0.28	+0.8
3,579,980	+		RR42_RS36240	0.29	+0.1
3,579,996	-		RR42_RS36240	0.30	-0.5
3,579,996	-		RR42_RS36240	0.30	-2.1
3,580,226	+		RR42_RS36240	0.45	+1.0
3,580,226	+		RR42_RS36240	0.45	+0.4
3,580,227	-		RR42_RS36240	0.45	-3.1
3,580,344	-		RR42_RS36240	0.53	-0.7
3,580,805	+		RR42_RS36240	0.85	+2.2
3,581,058	+				+0.7
3,581,059	-				-1.7
3,581,059	-				-0.1
3,581,280	-		RR42_RS36245	0.21	+0.7
3,581,765	-		RR42_RS36245	0.62	+0.4