Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36230

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,577,041	+		RR42_RS36225	0.30	-1.0
3,577,041	+		RR42_RS36225	0.30	-1.3
3,577,042	-		RR42_RS36225	0.30	+1.1
3,577,059	+		RR42_RS36225	0.32	+1.9
3,577,059	+		RR42_RS36225	0.32	-1.1
3,577,060	-		RR42_RS36225	0.32	-2.0
3,577,060	-		RR42_RS36225	0.32	+0.2
3,577,060	-		RR42_RS36225	0.32	+0.5
3,577,065	+		RR42_RS36225	0.33	+0.0
3,577,272	+		RR42_RS36225	0.53	-1.2
3,577,273	-		RR42_RS36225	0.53	-0.5
3,577,273	-		RR42_RS36225	0.53	-2.0
3,577,385	+		RR42_RS36225	0.63	+0.5
3,577,386	-		RR42_RS36225	0.64	-0.5
3,577,434	+		RR42_RS36225	0.68	-0.8
3,577,435	-		RR42_RS36225	0.68	+0.6
3,577,464	+		RR42_RS36225	0.71	-0.8
3,577,618	-		RR42_RS36225	0.86	-0.5
3,577,618	-		RR42_RS36225	0.86	-1.8
3,577,830	+				+0.4
3,577,830	+				+1.3
3,578,104	-		RR42_RS36230	0.17	+0.2
3,578,104	-		RR42_RS36230	0.17	+0.7
3,578,104	-		RR42_RS36230	0.17	+0.4
3,578,527	+		RR42_RS36230	0.73	+1.2
3,578,527	+		RR42_RS36230	0.73	+0.0
3,578,527	+		RR42_RS36230	0.73	-0.6
3,578,528	-		RR42_RS36230	0.74	-0.3
3,578,528	-		RR42_RS36230	0.74	-0.6
3,578,528	-		RR42_RS36230	0.74	+0.3
3,578,528	-		RR42_RS36230	0.74	-1.5
3,578,540	-		RR42_RS36230	0.75	-1.7
3,578,659	+				+0.7
3,578,722	+				-2.1
3,578,722	+				+0.6
3,578,782	+				+0.4
3,578,782	+				-2.1
3,578,887	-		RR42_RS36235	0.15	-1.0
3,578,956	+		RR42_RS36235	0.24	-1.3
3,579,069	+		RR42_RS36235	0.38	+0.2
3,579,272	+		RR42_RS36235	0.63	-1.8
3,579,310	-		RR42_RS36235	0.68	-1.5
3,579,310	-		RR42_RS36235	0.68	+1.6
3,579,310	-		RR42_RS36235	0.68	-0.8
3,579,412	-		RR42_RS36235	0.81	-0.5
3,579,412	-		RR42_RS36235	0.81	+1.8