Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35295

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,372,874	-		RR42_RS35290	0.54	+0.6
3,372,933	+		RR42_RS35290	0.60	+0.7
3,372,933	+		RR42_RS35290	0.60	+1.1
3,373,323	+				+0.6
3,373,323	+				-0.6
3,373,323	+				-2.4
3,373,324	-				-0.2
3,373,393	+				-1.3
3,373,406	-				-1.3
3,373,414	-				+1.2
3,373,420	+				-3.6
3,373,420	+				-1.0
3,373,420	+				-0.0
3,373,421	-				-2.2
3,373,429	+				+1.4
3,373,429	+				+0.3
3,373,433	+				+0.3
3,373,433	+				+0.9
3,373,434	-				+1.6
3,373,434	-				+1.6
3,373,434	-				+0.4
3,373,441	+				+1.7
3,373,441	+				+0.4
3,373,441	+				-0.3
3,373,441	+				-0.4
3,373,441	+				-0.7
3,373,442	-				-2.0
3,373,442	-				-1.2
3,373,442	-				+1.0
3,373,454	+				+0.4
3,373,454	+				+1.0
3,373,455	-				+0.1
3,373,461	+				-1.1
3,373,461	+				+0.3
3,373,461	+				+0.1
3,373,462	-				+0.7
3,373,462	-				+0.4
3,373,482	+				-1.4
3,373,485	+				+2.4
3,373,486	-				+0.8
3,373,486	-				-1.2
3,373,540	+				+0.1
3,373,559	+				-0.7
3,373,613	+				+1.1
3,373,614	-				-1.3
3,373,914	-		RR42_RS35295	0.42	-1.6
3,373,914	-		RR42_RS35295	0.42	-0.9
3,374,290	-				-0.3
3,374,365	+				+0.9
3,374,365	+				+0.4
3,374,365	+				-2.1
3,374,701	+		RR42_RS35300	0.35	+0.3
3,374,785	+		RR42_RS35300	0.43	+1.3
3,374,786	-		RR42_RS35300	0.43	+0.7
3,374,786	-		RR42_RS35300	0.43	-0.1
3,374,957	+		RR42_RS35300	0.61	+0.0
3,374,957	+		RR42_RS35300	0.61	-0.5
3,374,957	+		RR42_RS35300	0.61	-4.0
3,374,957	+		RR42_RS35300	0.61	+0.5
3,374,958	-		RR42_RS35300	0.61	+0.3
3,374,958	-		RR42_RS35300	0.61	-3.2
3,374,959	+		RR42_RS35300	0.61	+1.8
3,374,959	+		RR42_RS35300	0.61	+0.0
3,374,960	-		RR42_RS35300	0.61	-0.4
3,374,960	-		RR42_RS35300	0.61	+0.5
3,374,960	-		RR42_RS35300	0.61	-2.0
3,374,960	-		RR42_RS35300	0.61	-0.2
3,375,009	+		RR42_RS35300	0.66	+0.3
3,375,010	+		RR42_RS35300	0.66	+1.2
3,375,010	+		RR42_RS35300	0.66	+1.6