Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35210

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,351,053	+				-1.3
3,351,053	+				+0.1
3,351,053	+				+0.5
3,351,053	+				+0.1
3,351,053	+				-0.6
3,351,054	-				-3.2
3,351,054	-				-0.2
3,351,054	-				-0.1
3,351,112	+				+0.4
3,351,113	-				+0.3
3,351,160	-				+1.2
3,351,220	+				+1.2
3,351,276	+		RR42_RS35205	0.13	+0.2
3,351,276	+		RR42_RS35205	0.13	-0.5
3,351,276	+		RR42_RS35205	0.13	+1.0
3,351,283	+		RR42_RS35205	0.15	+1.9
3,351,283	+		RR42_RS35205	0.15	+0.4
3,351,284	-		RR42_RS35205	0.15	-0.5
3,351,285	+		RR42_RS35205	0.16	-0.7
3,351,285	+		RR42_RS35205	0.16	-0.8
3,351,285	+		RR42_RS35205	0.16	-0.9
3,351,444	+		RR42_RS35205	0.67	+1.0
3,351,445	-		RR42_RS35205	0.67	+1.0
3,351,445	-		RR42_RS35205	0.67	+1.0
3,351,751	-				+0.3
3,351,819	+				-0.3
3,351,819	+				+0.1
3,351,820	-				+1.0
3,351,820	-				+0.1
3,351,820	-				+0.3
3,351,820	-				+0.7
3,351,820	-				-0.4
3,351,851	+				-0.2
3,351,852	-				-0.6
3,352,024	+		RR42_RS35210	0.13	-2.0
3,352,025	-		RR42_RS35210	0.13	-1.6
3,352,025	-		RR42_RS35210	0.13	-0.1
3,352,025	-		RR42_RS35210	0.13	+0.5
3,352,025	-		RR42_RS35210	0.13	-0.4
3,352,267	-		RR42_RS35210	0.33	-0.1
3,352,402	+		RR42_RS35210	0.44	-1.2
3,352,642	+		RR42_RS35210	0.63	+0.2
3,352,643	-		RR42_RS35210	0.63	-1.8
3,352,643	-		RR42_RS35210	0.63	-0.4
3,352,643	-		RR42_RS35210	0.63	-1.0
3,352,832	-		RR42_RS35210	0.79	+0.1
3,353,075	+				+3.8
3,353,395	+		RR42_RS35215	0.23	+0.7
3,353,395	+		RR42_RS35215	0.23	-0.0
3,353,416	+		RR42_RS35215	0.26	-1.0
3,353,417	-		RR42_RS35215	0.26	+0.7
3,353,417	-		RR42_RS35215	0.26	-2.7
3,353,417	-		RR42_RS35215	0.26	-1.0
3,353,418	+		RR42_RS35215	0.26	+0.9
3,353,419	-		RR42_RS35215	0.26	-1.0
3,353,519	+		RR42_RS35215	0.36	-1.7
3,353,519	+		RR42_RS35215	0.36	+0.5
3,353,519	+		RR42_RS35215	0.36	+1.4
3,353,520	-		RR42_RS35215	0.36	-3.1
3,353,521	+		RR42_RS35215	0.36	-0.1
3,353,522	-		RR42_RS35215	0.36	-1.3
3,353,522	-		RR42_RS35215	0.36	-0.4
3,353,522	-		RR42_RS35215	0.36	-0.1
3,353,584	-		RR42_RS35215	0.43	-1.8
3,353,705	+		RR42_RS35215	0.55	-0.0
3,353,706	-		RR42_RS35215	0.55	+0.4
3,353,707	+		RR42_RS35215	0.55	-0.7
3,353,707	+		RR42_RS35215	0.55	-0.1
3,353,707	+		RR42_RS35215	0.55	-0.4
3,353,708	-		RR42_RS35215	0.55	-0.0
3,353,854	+		RR42_RS35215	0.70	+0.7
3,354,045	+		RR42_RS35215	0.89	-0.8