Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35160

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,341,084	+		RR42_RS35155	0.62	+3.0
3,341,085	-		RR42_RS35155	0.62	-0.0
3,341,085	-		RR42_RS35155	0.62	-2.9
3,341,086	+		RR42_RS35155	0.62	+1.4
3,341,086	+		RR42_RS35155	0.62	-0.2
3,341,086	+		RR42_RS35155	0.62	-1.3
3,341,087	-		RR42_RS35155	0.62	+0.9
3,341,186	+		RR42_RS35155	0.69	+2.3
3,341,186	+		RR42_RS35155	0.69	+0.3
3,341,186	+		RR42_RS35155	0.69	-1.8
3,341,186	+		RR42_RS35155	0.69	+1.0
3,341,186	+		RR42_RS35155	0.69	+1.0
3,341,187	-		RR42_RS35155	0.69	-0.0
3,341,187	-		RR42_RS35155	0.69	+0.2
3,341,204	+		RR42_RS35155	0.70	+0.5
3,341,205	-		RR42_RS35155	0.71	+0.0
3,341,318	+		RR42_RS35155	0.79	+1.3
3,341,318	+		RR42_RS35155	0.79	-0.6
3,341,318	+		RR42_RS35155	0.79	+0.2
3,341,318	+		RR42_RS35155	0.79	+0.9
3,341,318	+		RR42_RS35155	0.79	-2.4
3,341,318	+		RR42_RS35155	0.79	+0.1
3,341,319	-		RR42_RS35155	0.79	+0.0
3,341,319	-		RR42_RS35155	0.79	-2.4
3,341,319	-		RR42_RS35155	0.79	-0.2
3,341,319	-		RR42_RS35155	0.79	-1.1
3,341,325	-		RR42_RS35155	0.79	+0.9
3,341,677	+				+0.7
3,341,677	+				+0.4
3,341,677	+				-0.7
3,341,677	+				+0.6
3,341,692	+				-1.7
3,341,693	-				+0.6
3,341,701	-				-1.3
3,341,982	+		RR42_RS35160	0.16	-0.6
3,341,982	+		RR42_RS35160	0.16	+1.4
3,342,390	+		RR42_RS35160	0.49	-1.4
3,342,390	+		RR42_RS35160	0.49	+0.6
3,342,390	+		RR42_RS35160	0.49	+0.0
3,342,759	+		RR42_RS35160	0.78	+0.5
3,342,759	+		RR42_RS35160	0.78	-2.4
3,342,760	-		RR42_RS35160	0.78	-1.3
3,342,802	-		RR42_RS35160	0.82	+0.0
3,342,891	+		RR42_RS35160	0.89	-0.4
3,342,891	+		RR42_RS35160	0.89	-1.7
3,342,892	-		RR42_RS35160	0.89	-0.2
3,342,892	-		RR42_RS35160	0.89	+0.4
3,342,892	-		RR42_RS35160	0.89	+0.7
3,342,892	-		RR42_RS35160	0.89	-0.1
3,342,892	-		RR42_RS35160	0.89	+2.0
3,343,037	-				-0.5
3,343,091	-				-0.1
3,343,091	-				+0.7
3,343,093	+				-0.5
3,343,093	+				+0.8
3,343,094	-				+0.8
3,343,094	-				-0.3
3,343,094	-				-0.6
3,343,094	-				-0.3
3,343,094	-				+0.5
3,343,096	+				-0.2
3,343,096	+				+1.3
3,343,097	-				+0.0
3,343,097	-				+0.6
3,343,097	-				+0.2
3,343,097	-				-0.6
3,343,117	-				+0.7
3,343,117	-				-0.6
3,343,541	+		RR42_RS35165	0.34	+0.5
3,343,600	+		RR42_RS35165	0.41	+0.5
3,343,600	+		RR42_RS35165	0.41	+0.5
3,343,601	-		RR42_RS35165	0.41	+0.6
3,343,804	+		RR42_RS35165	0.64	+0.5
3,343,892	-		RR42_RS35165	0.74	+0.6
3,343,962	+		RR42_RS35165	0.82	+0.6
3,344,023	+		RR42_RS35165	0.89	+1.3
3,344,023	+		RR42_RS35165	0.89	-0.2
3,344,023	+		RR42_RS35165	0.89	-1.8
3,344,023	+		RR42_RS35165	0.89	+0.3
3,344,024	-		RR42_RS35165	0.89	-0.4