Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34380

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,135,976	+		RR42_RS34370	0.73	-0.1
3,135,976	+		RR42_RS34370	0.73	-0.6
3,135,976	+		RR42_RS34370	0.73	-1.9
3,135,977	-		RR42_RS34370	0.74	-0.5
3,136,040	+		RR42_RS34370	0.85	-2.4
3,136,058	-		RR42_RS34370	0.89	+2.9
3,136,175	+				+2.7
3,136,175	+				-0.4
3,136,175	+				+0.2
3,136,175	+				-0.6
3,136,176	-				+1.3
3,136,193	+				-0.1
3,136,303	-		RR42_RS34375	0.45	-0.4
3,136,304	+		RR42_RS34375	0.46	+0.9
3,136,304	+		RR42_RS34375	0.46	+0.6
3,136,304	+		RR42_RS34375	0.46	-2.0
3,136,305	-		RR42_RS34375	0.46	-0.9
3,136,305	-		RR42_RS34375	0.46	-0.4
3,136,305	-		RR42_RS34375	0.46	-1.2
3,136,305	-		RR42_RS34375	0.46	-0.5
3,136,305	-		RR42_RS34375	0.46	+0.2
3,136,305	-		RR42_RS34375	0.46	-0.8
3,136,305	-		RR42_RS34375	0.46	-0.3
3,136,305	-		RR42_RS34375	0.46	-2.2
3,136,305	-		RR42_RS34375	0.46	+0.6
3,136,305	-		RR42_RS34375	0.46	-0.4
3,136,305	-		RR42_RS34375	0.46	-0.2
3,136,728	+				+0.4
3,136,728	+				+0.1
3,136,767	+				+0.5
3,136,767	+				-0.4
3,136,768	-				+0.3
3,136,849	+				+1.2
3,137,040	+				+0.6
3,137,040	+				+1.1
3,137,040	+				-2.4
3,137,083	-				-1.6
3,137,083	-				+0.3
3,137,169	+		RR42_RS34380	0.14	-1.2
3,137,169	+		RR42_RS34380	0.14	-0.2
3,137,169	+		RR42_RS34380	0.14	-1.0
3,137,169	+		RR42_RS34380	0.14	+0.5
3,137,169	+		RR42_RS34380	0.14	+1.0
3,137,170	-		RR42_RS34380	0.14	+0.6
3,137,574	+		RR42_RS34380	0.43	+0.1
3,137,574	+		RR42_RS34380	0.43	-3.2
3,137,575	-		RR42_RS34380	0.43	+0.3
3,137,679	+		RR42_RS34380	0.50	-3.1
3,137,679	+		RR42_RS34380	0.50	-0.7
3,137,679	+		RR42_RS34380	0.50	+0.1
3,137,694	+		RR42_RS34380	0.51	+0.1
3,137,694	+		RR42_RS34380	0.51	-0.9
3,137,768	+		RR42_RS34380	0.57	-0.1
3,138,569	+				-3.2
3,138,577	-				-1.2
3,138,577	-				+1.0
3,138,588	+				-2.4
3,138,588	+				-0.4
3,138,589	-				-0.8
3,138,714	+		RR42_RS34385	0.19	-0.4
3,138,714	+		RR42_RS34385	0.19	-2.6
3,138,822	+		RR42_RS34385	0.34	-1.6
3,138,822	+		RR42_RS34385	0.34	-0.9
3,138,823	-		RR42_RS34385	0.34	-2.0
3,138,823	-		RR42_RS34385	0.34	-2.0
3,139,135	-		RR42_RS34385	0.77	-3.1
3,139,135	-		RR42_RS34385	0.77	-0.3
3,139,311	+				-3.7
3,139,311	+				+0.7
3,139,311	+				-0.2
3,139,312	-				-2.6