Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34280

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,118,121	+				-0.7
3,118,121	+				-2.7
3,118,121	+				-0.9
3,118,121	+				-2.0
3,118,121	+				-2.9
3,118,122	-				+0.7
3,118,122	-				-1.2
3,118,122	-				+1.2
3,118,122	-				-1.4
3,118,179	-				+0.7
3,118,399	+				-1.4
3,118,400	-				-0.9
3,118,449	-				-1.6
3,118,449	-				-1.1
3,118,532	+				-1.0
3,118,548	+				+0.4
3,118,548	+				+0.0
3,118,549	-				-0.3
3,118,549	-				+0.4
3,118,759	-		RR42_RS34275	0.59	+1.5
3,118,870	+		RR42_RS34275	0.86	+1.8
3,118,870	+		RR42_RS34275	0.86	+1.4
3,118,870	+		RR42_RS34275	0.86	-0.1
3,118,871	-		RR42_RS34275	0.86	-0.5
3,119,174	+		RR42_RS34280	0.81	+1.6
3,119,174	+		RR42_RS34280	0.81	+1.4
3,119,175	-		RR42_RS34280	0.82	+0.3
3,119,175	-		RR42_RS34280	0.82	+1.1
3,119,175	-		RR42_RS34280	0.82	-0.7
3,119,273	+				-3.3
3,119,273	+				+0.1
3,119,274	-				+0.6
3,119,274	-				+0.4
3,119,278	+				-0.6
3,119,279	-				-0.4
3,119,279	-				+0.7
3,119,414	-				+0.5
3,119,414	-				+1.5
3,119,516	+				-2.4
3,119,517	-				+1.7
3,119,633	+		RR42_RS34285	0.20	+0.0
3,119,633	+		RR42_RS34285	0.20	+0.1
3,119,634	-		RR42_RS34285	0.20	+0.1
3,119,634	-		RR42_RS34285	0.20	-0.5
3,119,717	+		RR42_RS34285	0.29	-1.0
3,119,718	-		RR42_RS34285	0.29	-0.3
3,119,742	+		RR42_RS34285	0.31	+2.5
3,119,742	+		RR42_RS34285	0.31	-0.5
3,119,743	-		RR42_RS34285	0.31	-1.0
3,119,759	+		RR42_RS34285	0.33	-0.6
3,119,759	+		RR42_RS34285	0.33	-0.6
3,119,759	+		RR42_RS34285	0.33	-1.0
3,119,759	+		RR42_RS34285	0.33	-1.4
3,119,760	-		RR42_RS34285	0.33	+2.4
3,119,760	-		RR42_RS34285	0.33	-0.3
3,119,760	-		RR42_RS34285	0.33	-0.1
3,119,943	+		RR42_RS34285	0.52	-0.7
3,119,944	-		RR42_RS34285	0.52	-0.5