Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34250

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,111,069	-		RR42_RS34245	0.77	+1.1
3,111,070	+		RR42_RS34245	0.77	-0.5
3,111,070	+		RR42_RS34245	0.77	-0.3
3,111,085	+		RR42_RS34245	0.78	-1.0
3,111,305	-		RR42_RS34245	0.84	+2.3
3,111,314	-		RR42_RS34245	0.84	+0.6
3,111,334	+		RR42_RS34245	0.85	+0.8
3,111,512	-		RR42_RS34245	0.90	-0.1
3,111,814	+				-0.4
3,111,814	+				+2.0
3,111,814	+				+0.4
3,111,814	+				-1.9
3,111,815	-				-0.7
3,111,815	-				+1.0
3,111,815	-				-0.0
3,111,920	+				+0.3
3,111,920	+				+1.1
3,111,921	-				-1.9
3,111,921	-				+0.2
3,111,921	-				+0.2
3,111,921	-				+1.0
3,111,994	+				+0.5
3,111,994	+				+1.5
3,111,994	+				+0.4
3,111,995	-				+0.5
3,111,995	-				+0.0
3,111,995	-				+0.1
3,112,051	+				+1.0
3,112,051	+				+1.3
3,112,052	-				-0.4
3,112,144	+		RR42_RS34250	0.12	+0.7
3,112,144	+		RR42_RS34250	0.12	-0.8
3,112,145	-		RR42_RS34250	0.12	+0.4
3,112,343	+		RR42_RS34250	0.34	+1.3
3,112,343	+		RR42_RS34250	0.34	-0.8
3,112,343	+		RR42_RS34250	0.34	-3.3
3,112,344	-		RR42_RS34250	0.34	-3.6
3,112,344	-		RR42_RS34250	0.34	-0.0
3,112,344	-		RR42_RS34250	0.34	-0.4
3,112,344	-		RR42_RS34250	0.34	+0.2
3,112,358	+		RR42_RS34250	0.35	-1.7
3,112,359	-		RR42_RS34250	0.36	-0.1
3,112,499	-		RR42_RS34250	0.51	-0.0
3,112,554	+		RR42_RS34250	0.57	+1.1
3,112,625	+		RR42_RS34250	0.65	-0.5
3,112,625	+		RR42_RS34250	0.65	-1.3
3,112,625	+		RR42_RS34250	0.65	+2.0
3,112,626	-		RR42_RS34250	0.65	+0.4
3,112,626	-		RR42_RS34250	0.65	+0.8
3,112,626	-		RR42_RS34250	0.65	-1.0
3,112,626	-		RR42_RS34250	0.65	+0.2
3,112,626	-		RR42_RS34250	0.65	-0.2
3,112,626	-		RR42_RS34250	0.65	-0.4
3,112,670	+		RR42_RS34250	0.70	+0.1
3,112,768	-		RR42_RS34250	0.81	-1.4
3,112,785	-		RR42_RS34250	0.83	+1.1
3,112,941	-				-0.1
3,112,941	-				+0.4
3,113,050	+				-0.9
3,113,050	+				-0.1
3,113,051	-				-0.2
3,113,198	-				-3.3
3,113,215	+				-0.4
3,113,215	+				-3.0
3,113,215	+				-1.2
3,113,224	+				+1.0
3,113,264	-				-0.8
3,113,606	-		RR42_RS34255	0.29	-1.0
3,113,875	-		RR42_RS34255	0.47	-1.6