Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34060

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,070,169	+		RR42_RS34055	0.42	+1.4
3,070,169	+		RR42_RS34055	0.42	-0.4
3,070,170	-		RR42_RS34055	0.42	-2.1
3,070,170	-		RR42_RS34055	0.42	-0.2
3,070,170	-		RR42_RS34055	0.42	+0.3
3,070,266	-		RR42_RS34055	0.50	-0.0
3,070,266	-		RR42_RS34055	0.50	+0.7
3,070,423	+		RR42_RS34055	0.62	-3.2
3,070,428	-		RR42_RS34055	0.63	-0.7
3,070,428	-		RR42_RS34055	0.63	+0.6
3,070,428	-		RR42_RS34055	0.63	+0.1
3,070,497	-		RR42_RS34055	0.68	-0.1
3,070,614	+		RR42_RS34055	0.78	+0.9
3,070,615	-		RR42_RS34055	0.78	-0.0
3,070,635	+		RR42_RS34055	0.79	-0.7
3,070,937	+				+0.2
3,071,051	-				-0.8
3,071,051	-				+1.3
3,071,070	-				-1.4
3,071,070	-				-0.1
3,071,070	-				-1.3
3,071,237	-		RR42_RS34060	0.24	-0.9
3,071,429	-		RR42_RS34060	0.46	-1.7
3,071,731	+		RR42_RS34060	0.81	-0.8
3,071,846	+				-0.7
3,071,847	-				-0.4
3,071,847	-				+0.4
3,071,983	+				+0.9
3,071,984	-				-2.5
3,071,984	-				-1.1
3,071,984	-				+0.3
3,071,984	-				+0.1
3,071,984	-				+0.4
3,071,984	-				-2.0
3,071,984	-				-0.6
3,072,057	+				-1.1
3,072,057	+				-0.7
3,072,058	-				-0.0
3,072,058	-				-4.2
3,072,058	-				+0.3
3,072,301	-		RR42_RS34065	0.30	-0.3
3,072,301	-		RR42_RS34065	0.30	-0.2
3,072,498	+		RR42_RS34065	0.50	-0.1
3,072,499	-		RR42_RS34065	0.50	-0.0
3,072,586	-		RR42_RS34065	0.59	-0.2
3,072,586	-		RR42_RS34065	0.59	-0.4
3,072,640	+		RR42_RS34065	0.64	+1.0
3,072,641	-		RR42_RS34065	0.64	+1.3
3,072,641	-		RR42_RS34065	0.64	-1.7
3,072,802	-		RR42_RS34065	0.81	+0.5
3,072,813	+		RR42_RS34065	0.82	+0.4
3,072,884	-		RR42_RS34065	0.89	-1.9
3,072,884	-		RR42_RS34065	0.89	+0.1
3,072,884	-		RR42_RS34065	0.89	+0.9