Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33665

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,979,742	-		RR42_RS33660	0.45	-0.6
2,979,742	-		RR42_RS33660	0.45	-0.2
2,979,851	-		RR42_RS33660	0.56	-0.1
2,980,155	+		RR42_RS33660	0.88	-3.5
2,980,197	+				+0.1
2,980,197	+				+1.2
2,980,197	+				-2.4
2,980,198	-				+3.0
2,980,267	+				-0.3
2,980,268	-				-0.7
2,980,268	-				-2.9
2,980,280	-				-0.5
2,980,280	-				-1.2
2,980,375	-				+0.8
2,980,385	+				-0.6
2,980,385	+				+0.0
2,980,385	+				+0.9
2,980,385	+				-1.2
2,980,385	+				+0.2
2,980,385	+				-0.2
2,980,385	+				+1.5
2,980,385	+				-0.5
2,980,385	+				-0.2
2,980,385	+				+0.4
2,980,385	+				+0.2
2,980,386	-				-0.3
2,980,386	-				-1.1
2,980,386	-				+0.1
2,980,386	-				-0.5
2,980,386	-				-0.7
2,980,386	-				+0.8
2,980,386	-				+1.2
2,980,386	-				+1.2
2,980,386	-				+1.6
2,980,395	+				+1.0
2,980,395	+				-2.2
2,980,395	+				-2.4
2,980,396	-				-0.5
2,980,396	-				-3.1
2,980,396	-				-0.3
2,980,492	-				-0.6
2,980,494	+				+1.0
2,980,495	-				-1.7
2,980,630	+				+0.7
2,980,630	+				+0.7
2,980,630	+				-1.1
2,980,631	-		RR42_RS33665	0.10	+0.1
2,980,693	-		RR42_RS33665	0.17	-1.6
2,980,946	-		RR42_RS33665	0.45	+0.9
2,981,035	+		RR42_RS33665	0.55	-1.2
2,981,035	+		RR42_RS33665	0.55	-0.1
2,981,035	+		RR42_RS33665	0.55	+0.5
2,981,036	-		RR42_RS33665	0.55	+0.1
2,981,036	-		RR42_RS33665	0.55	-0.1
2,981,036	-		RR42_RS33665	0.55	-0.7
2,981,036	-		RR42_RS33665	0.55	-0.5
2,981,083	+		RR42_RS33665	0.60	+1.6
2,981,083	+		RR42_RS33665	0.60	+1.1
2,981,084	-		RR42_RS33665	0.60	+0.8
2,981,186	-		RR42_RS33665	0.72	+0.0
2,981,186	-		RR42_RS33665	0.72	+0.9
2,981,227	-		RR42_RS33665	0.76	+0.1
2,981,382	-				+1.1
2,981,410	-				-0.3
2,981,469	+				-1.9
2,981,470	-				+0.2
2,981,540	+				-0.9
2,981,540	+				+0.1
2,981,540	+				-1.1
2,981,540	+				-1.1
2,981,541	-				-0.2
2,981,541	-				+0.4
2,981,541	-				+0.4
2,981,601	+				+0.2
2,981,601	+				-0.8
2,981,602	-				-0.3
2,981,603	+				+0.0
2,981,603	+				-0.8
2,981,603	+				+0.9
2,981,603	+				+1.1
2,981,975	+		RR42_RS33670	0.50	+0.5
2,981,975	+		RR42_RS33670	0.50	+0.7
2,981,999	+		RR42_RS33670	0.53	-0.6
2,981,999	+		RR42_RS33670	0.53	+1.6
2,982,000	-		RR42_RS33670	0.53	-0.4
2,982,177	+		RR42_RS33670	0.73	-0.7
2,982,178	-		RR42_RS33670	0.73	-1.7