Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33180

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,849,138	+		RR42_RS33175	0.81	-0.5
2,849,138	+		RR42_RS33175	0.81	+1.2
2,849,139	-		RR42_RS33175	0.81	+0.4
2,849,318	+				+0.2
2,849,318	+				+1.3
2,849,318	+				-3.7
2,849,319	-				-0.7
2,849,319	-				-0.0
2,849,451	+				-0.1
2,849,492	+				+2.5
2,849,492	+				+1.2
2,849,493	-				-1.8
2,849,500	+				-1.1
2,849,501	-				-2.3
2,849,533	-				+1.0
2,849,540	+				+0.2
2,849,540	+				+0.4
2,849,541	-				-0.5
2,849,556	+				-0.2
2,849,557	-				-1.4
2,849,675	+				+0.8
2,849,676	-				+0.2
2,849,676	-				-0.5
2,849,712	+				-0.9
2,849,717	-				+0.5
2,849,742	+				+0.4
2,849,744	+				-0.3
2,849,747	+				-1.8
2,849,783	+				+0.5
2,849,783	+				-0.6
2,849,938	+				-0.8
2,849,952	+				-0.1
2,849,952	+				+0.9
2,849,953	-				-0.2
2,849,953	-				+0.1
2,849,953	-				+0.9
2,850,004	+				-2.1
2,850,004	+				-0.6
2,850,004	+				-1.4
2,850,005	-				-3.0
2,850,005	-				-3.0
2,850,005	-				-1.8
2,850,005	-				-0.1
2,850,252	-		RR42_RS33180	0.38	-3.1
2,850,410	-		RR42_RS33180	0.58	-2.0
2,850,427	+		RR42_RS33180	0.60	-0.9
2,850,428	-		RR42_RS33180	0.60	-3.6
2,850,428	-		RR42_RS33180	0.60	-1.0
2,850,428	-		RR42_RS33180	0.60	-2.7
2,850,428	-		RR42_RS33180	0.60	-1.6
2,850,467	+		RR42_RS33180	0.65	-3.8
2,850,551	-		RR42_RS33180	0.76	-1.7
2,850,597	+		RR42_RS33180	0.82	-1.1
2,850,672	-				-0.1
2,850,679	+				-3.0
2,850,680	-				-1.4
2,850,691	+				-0.1
2,850,691	+				+0.1
2,850,691	+				-3.0
2,850,692	-				-0.5
2,850,692	-				-1.7
2,850,732	+				-3.0
2,850,732	+				-2.7
2,850,733	-				-2.3
2,850,733	-				-2.6
2,850,733	-				-2.3
2,850,747	-				-1.1
2,850,747	-				+0.9
2,850,762	+				-1.1
2,850,763	-				+0.3
2,850,763	-				-0.5
2,850,763	-				-0.6
2,850,763	-				-2.1
2,850,787	+				-1.7
2,850,791	+				-1.8
2,850,791	+				-3.5
2,850,791	+				-3.9
2,850,791	+				+1.9
2,850,791	+				-3.1
2,850,792	-				+0.9
2,850,795	+				-1.8
2,850,795	+				-0.4
2,850,795	+				-1.7
2,850,796	-				+0.7
2,850,796	-				-0.4
2,850,796	-				-1.9
2,850,796	-				-2.4
2,850,796	-				-0.1
2,850,797	+				-1.1
2,850,797	+				-1.9
2,850,798	-				-1.7
2,850,844	+				-3.2
2,850,847	+				-1.2
2,850,847	+				-0.7
2,850,847	+				-2.1
2,850,848	-				+1.4
2,850,848	-				-0.4
2,850,848	-				-0.9
2,850,938	+				-1.7
2,850,974	+				-3.2
2,850,974	+				-2.4
2,850,974	+				-3.0
2,850,974	+				-1.8
2,851,023	+				-1.6
2,851,025	+				+0.9
2,851,027	+				-3.6
2,851,027	+				-0.4
2,851,027	+				-3.2
2,851,027	+				-0.2
2,851,027	+				-3.0
2,851,028	-				-1.7
2,851,028	-				+0.5
2,851,028	-				+1.6
2,851,028	-				-0.8
2,851,028	-				-2.1
2,851,028	-				-1.9
2,851,028	-				+0.3
2,851,028	-				+0.3
2,851,029	+				-1.1
2,851,029	+				-1.2
2,851,029	+				-1.4
2,851,029	+				-1.9
2,851,030	-				+2.0
2,851,030	-				-1.8
2,851,030	-				-1.4
2,851,180	+				-2.3
2,851,233	+				-0.8
2,851,355	-				+3.7
2,851,355	-				+0.7
2,851,355	-				+0.9
2,851,430	-				-1.4
2,851,475	-				-0.8
2,851,488	+				+1.3
2,851,620	-				-2.3
2,851,715	+		RR42_RS33185	0.16	+1.0
2,851,715	+		RR42_RS33185	0.16	-0.1
2,851,716	-		RR42_RS33185	0.17	+0.4
2,851,716	-		RR42_RS33185	0.17	+0.1