Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33170

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,845,523	+		RR42_RS33165	0.59	-0.6
2,845,721	+		RR42_RS33165	0.83	-0.4
2,845,722	-		RR42_RS33165	0.83	+0.4
2,845,725	+		RR42_RS33165	0.83	+0.0
2,845,725	+		RR42_RS33165	0.83	-0.6
2,845,725	+		RR42_RS33165	0.83	-0.5
2,845,725	+		RR42_RS33165	0.83	-0.2
2,845,725	+		RR42_RS33165	0.83	-0.6
2,845,726	-		RR42_RS33165	0.83	-1.9
2,845,726	-		RR42_RS33165	0.83	+1.1
2,845,726	-		RR42_RS33165	0.83	-0.2
2,845,726	-		RR42_RS33165	0.83	+0.9
2,845,726	-		RR42_RS33165	0.83	-1.1
2,845,726	-		RR42_RS33165	0.83	-0.0
2,845,726	-		RR42_RS33165	0.83	-3.5
2,845,726	-		RR42_RS33165	0.83	-0.6
2,845,956	+				+0.8
2,845,956	+				-0.7
2,845,956	+				+1.1
2,845,957	-				-0.8
2,846,034	-				+2.6
2,846,041	+				-0.4
2,846,042	-				+0.1
2,846,049	+				-0.5
2,846,148	+				-1.1
2,846,148	+				+1.3
2,846,148	+				-1.1
2,846,148	+				-1.3
2,846,149	-				+1.6
2,846,149	-				+2.8
2,846,149	-				-3.1
2,846,149	-				-0.8
2,846,190	-				+0.4
2,846,190	-				+1.9
2,846,190	-				+2.5
2,846,250	+				-3.6
2,846,250	+				-2.6
2,846,250	+				-1.4
2,846,251	-				-0.1
2,846,251	-				-0.7
2,846,251	-				-0.7
2,846,253	+				-1.4
2,846,271	+				-0.6
2,846,272	-				-2.9
2,846,272	-				-0.5
2,846,274	+				-0.8
2,846,275	-				-3.0
2,846,275	-				-1.5
2,846,283	+				-3.6
2,846,284	-				-3.0
2,846,284	-				-4.3
2,846,337	-				-1.3
2,846,353	+				-3.0
2,846,433	+				+0.8
2,846,460	+				-0.1
2,846,460	+				+3.5
2,846,461	-				-3.2
2,846,500	-				+0.2
2,846,503	-				-0.1
2,846,535	+				+0.4
2,846,535	+				-2.3
2,846,565	+				-1.4
2,846,565	+				-0.1
2,846,616	+		RR42_RS33170	0.14	+0.4
2,846,639	-		RR42_RS33170	0.16	-1.9
2,846,639	-		RR42_RS33170	0.16	-0.9
2,846,639	-		RR42_RS33170	0.16	+0.7
2,846,639	-		RR42_RS33170	0.16	+0.2
2,846,745	+		RR42_RS33170	0.25	-0.2
2,846,746	-		RR42_RS33170	0.26	+0.7
2,846,746	-		RR42_RS33170	0.26	-0.3
2,846,790	+		RR42_RS33170	0.30	+0.2
2,846,791	-		RR42_RS33170	0.30	-2.3
2,846,791	-		RR42_RS33170	0.30	+0.9
2,846,791	-		RR42_RS33170	0.30	-1.7
2,846,959	+		RR42_RS33170	0.45	+0.7
2,847,216	+		RR42_RS33170	0.67	+0.5
2,847,217	-		RR42_RS33170	0.68	-0.5
2,847,239	-		RR42_RS33170	0.70	+0.2
2,847,264	+		RR42_RS33170	0.72	-2.1
2,847,285	+		RR42_RS33170	0.74	+0.1
2,847,285	+		RR42_RS33170	0.74	+0.9
2,847,286	-		RR42_RS33170	0.74	+0.3
2,847,321	+		RR42_RS33170	0.77	-2.8
2,847,321	+		RR42_RS33170	0.77	-0.4
2,847,394	+		RR42_RS33170	0.83	-2.9
2,847,426	+		RR42_RS33170	0.86	-0.5
2,847,426	+		RR42_RS33170	0.86	+0.0
2,847,426	+		RR42_RS33170	0.86	-0.8
2,847,427	-		RR42_RS33170	0.86	-0.4
2,847,427	-		RR42_RS33170	0.86	+1.9
2,847,427	-		RR42_RS33170	0.86	+1.1
2,847,427	-		RR42_RS33170	0.86	+0.4
2,847,571	-				-0.3
2,847,571	-				+1.4
2,847,802	-				+1.5
2,848,205	+		RR42_RS33175	0.26	+0.5
2,848,205	+		RR42_RS33175	0.26	+0.4
2,848,205	+		RR42_RS33175	0.26	+1.7
2,848,206	-		RR42_RS33175	0.26	-0.0
2,848,206	-		RR42_RS33175	0.26	+0.6
2,848,206	-		RR42_RS33175	0.26	-1.2
2,848,206	-		RR42_RS33175	0.26	-0.0
2,848,212	-		RR42_RS33175	0.27	-0.5
2,848,212	-		RR42_RS33175	0.27	+1.7
2,848,212	-		RR42_RS33175	0.27	+0.7