Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31480

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,441,793	+		RR42_RS31475	0.11	+0.8
2,441,793	+		RR42_RS31475	0.11	-1.2
2,441,794	-		RR42_RS31475	0.11	-1.8
2,441,794	-		RR42_RS31475	0.11	-0.6
2,441,878	-		RR42_RS31475	0.24	-2.2
2,441,985	+		RR42_RS31475	0.41	+0.4
2,441,985	+		RR42_RS31475	0.41	-1.2
2,441,986	-		RR42_RS31475	0.41	-2.4
2,442,072	+		RR42_RS31475	0.54	+0.9
2,442,072	+				+1.1
2,442,072	+		RR42_RS31475	0.54	+0.9
2,442,072	+		RR42_RS31475	0.54	-0.2
2,442,073	-		RR42_RS31475	0.55	+1.1
2,442,073	-		RR42_RS31475	0.55	-0.2
2,442,073	-		RR42_RS31475	0.55	+0.9
2,442,073	-		RR42_RS31475	0.55	+0.3
2,442,073	-		RR42_RS31475	0.55	-0.8
2,442,169	-		RR42_RS31475	0.69	-1.8
2,442,169	-		RR42_RS31475	0.69	+0.4
2,442,183	+		RR42_RS31475	0.72	-1.3
2,442,183	+		RR42_RS31475	0.72	-0.6
2,442,183	+		RR42_RS31475	0.72	+0.2
2,442,184	-		RR42_RS31475	0.72	-0.6
2,442,184	-		RR42_RS31475	0.72	-0.8
2,442,223	+		RR42_RS31475	0.78	-0.6
2,442,404	+				-2.6
2,442,404	+				-0.1
2,442,404	+				-0.4
2,442,405	-				-2.4
2,442,405	-				+0.1
2,442,405	-				+0.2
2,442,590	+				+0.7
2,442,590	+				+0.0
2,442,591	-				+0.1
2,442,593	+				-0.5
2,442,593	+				+0.2
2,442,594	-				+0.0
2,442,594	-				+0.1
2,443,156	+		RR42_RS31480	0.18	-1.5
2,443,157	-		RR42_RS31480	0.18	+1.2
2,443,444	+		RR42_RS31480	0.32	+0.4
2,443,714	+		RR42_RS31480	0.46	-0.8
2,443,715	-		RR42_RS31480	0.46	-0.3
2,443,811	-		RR42_RS31480	0.50	-1.4
2,443,811	-		RR42_RS31480	0.50	-1.8
2,444,005	-		RR42_RS31480	0.60	-1.0
2,444,050	+		RR42_RS31480	0.62	+0.8
2,444,051	-		RR42_RS31480	0.62	-2.1
2,444,134	-		RR42_RS31480	0.66	-1.2
2,444,149	+		RR42_RS31480	0.67	-0.4
2,444,149	+		RR42_RS31480	0.67	-0.4
2,444,150	-		RR42_RS31480	0.67	-1.5
2,444,419	+		RR42_RS31480	0.80	+0.5
2,444,420	-		RR42_RS31480	0.80	+0.4
2,444,560	+		RR42_RS31480	0.87	+0.5
2,444,567	-		RR42_RS31480	0.88	-0.1
2,444,567	-		RR42_RS31480	0.88	-0.8
2,444,705	-				-1.0
2,444,753	-				+1.1
2,444,856	+				-1.2
2,444,889	+				+0.0
2,444,889	+				-2.9
2,444,890	-				+1.3
2,444,913	+				+1.0
2,444,914	-				+1.9
2,444,952	+				+0.0
2,444,953	-				-2.5
2,444,980	-				+1.3
2,444,980	-				-2.4
2,445,060	+		RR42_RS31485	0.32	-1.1
2,445,189	+		RR42_RS31485	0.69	+0.6
2,445,189	+		RR42_RS31485	0.69	-0.7
2,445,189	+		RR42_RS31485	0.69	+0.8
2,445,189	+		RR42_RS31485	0.69	+0.0
2,445,190	-		RR42_RS31485	0.69	+0.1
2,445,190	-		RR42_RS31485	0.69	+1.6
2,445,190	-		RR42_RS31485	0.69	+0.7
2,445,328	+				+0.7
2,445,329	-				+0.1
2,445,329	-				+1.3
2,445,329	-				-1.8
2,445,352	-				+1.5
2,445,393	+				+0.1
2,445,393	+				+0.6
2,445,394	-				+0.4
2,445,394	-				-0.6
2,445,414	+				-0.4
2,445,415	-				+0.8
2,445,434	+				-3.1
2,445,434	+				-0.7
2,445,435	-				+0.1
2,445,435	-				-0.6
2,445,435	-				+0.1
2,445,440	+				+0.3
2,445,441	-				-0.7
2,445,441	-				-0.9
2,445,696	-				+0.1