Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31435

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,434,165	+		RR42_RS31430	0.49	-1.2
2,434,294	+		RR42_RS31430	0.56	+0.0
2,434,294	+		RR42_RS31430	0.56	+0.8
2,434,294	+		RR42_RS31430	0.56	+0.8
2,434,295	-		RR42_RS31430	0.56	-0.3
2,434,463	-		RR42_RS31430	0.65	-0.9
2,434,475	-		RR42_RS31430	0.65	-2.0
2,434,528	+		RR42_RS31430	0.68	-0.6
2,434,588	+		RR42_RS31430	0.71	-0.6
2,434,588	+		RR42_RS31430	0.71	+0.7
2,434,588	+		RR42_RS31430	0.71	-0.6
2,434,610	-		RR42_RS31430	0.72	-1.8
2,434,610	-		RR42_RS31430	0.72	-2.5
2,434,610	-		RR42_RS31430	0.72	+1.2
2,434,793	-		RR42_RS31430	0.82	+0.4
2,434,795	+		RR42_RS31430	0.82	+0.9
2,434,864	+		RR42_RS31430	0.86	+0.1
2,435,194	+				-1.9
2,435,253	-		RR42_RS31435	0.23	+0.9
2,435,664	-				-0.6
2,435,761	+				+0.1
2,435,761	+				-0.3
2,435,761	+				-1.2
2,435,762	-				-1.1
2,435,762	-				-0.9
2,435,771	+				-0.1
2,435,771	+				-3.4
2,435,772	-				+0.0
2,435,813	+		RR42_RS31440	0.17	+1.7
2,435,813	+		RR42_RS31440	0.17	-1.2
2,435,813	+		RR42_RS31440	0.17	-0.2
2,435,814	-		RR42_RS31440	0.18	-0.9
2,435,814	-		RR42_RS31440	0.18	-0.6
2,435,814	-		RR42_RS31440	0.18	+0.8
2,435,814	-		RR42_RS31440	0.18	+0.8
2,435,814	-		RR42_RS31440	0.18	-2.0
2,435,814	-		RR42_RS31440	0.18	+1.6
2,435,814	-		RR42_RS31440	0.18	+0.7
2,435,814	-		RR42_RS31440	0.18	+0.4
2,436,035	-				+1.3
2,436,092	+				+1.0
2,436,093	-				-0.5
2,436,093	-				+1.5
2,436,226	-		RR42_RS31445	0.10	-1.0
2,436,226	-		RR42_RS31445	0.10	+0.1
2,436,257	+		RR42_RS31445	0.13	-3.2
2,436,258	-		RR42_RS31445	0.13	-0.3
2,436,270	-		RR42_RS31445	0.14	-0.0
2,436,469	-		RR42_RS31445	0.33	+0.3
2,436,489	+		RR42_RS31445	0.34	-1.6
2,436,489	+		RR42_RS31445	0.34	-0.6
2,436,490	-		RR42_RS31445	0.35	-0.9
2,436,490	-		RR42_RS31445	0.35	+3.0
2,436,490	-		RR42_RS31445	0.35	+0.2
2,436,499	-		RR42_RS31445	0.35	-0.2
2,436,499	-		RR42_RS31445	0.35	+0.3
2,436,501	+		RR42_RS31445	0.36	+1.8
2,436,519	+		RR42_RS31445	0.37	+0.4
2,436,520	-		RR42_RS31445	0.37	-1.7
2,436,520	-		RR42_RS31445	0.37	-0.1
2,436,551	+		RR42_RS31445	0.40	+0.3