Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31430

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,432,266	+				-0.3
2,432,267	-				-0.6
2,432,270	-				+1.1
2,432,270	-				-2.0
2,432,306	-				+0.1
2,432,354	+				-2.7
2,432,409	+				+1.9
2,432,592	+		RR42_RS31425	0.23	-0.1
2,433,043	+		RR42_RS31425	0.88	-3.1
2,433,049	+		RR42_RS31425	0.89	-0.5
2,433,121	+				+0.5
2,433,130	-				-1.2
2,433,144	+				-0.4
2,433,176	-				-0.4
2,433,245	+				+0.3
2,433,246	-				+0.9
2,433,373	-				-0.2
2,433,373	-				+0.4
2,433,494	-		RR42_RS31430	0.13	+1.3
2,433,701	-		RR42_RS31430	0.24	-0.5
2,433,747	+		RR42_RS31430	0.26	-0.1
2,433,848	-		RR42_RS31430	0.32	-0.4
2,433,989	-		RR42_RS31430	0.39	+0.1
2,434,043	-		RR42_RS31430	0.42	-0.5
2,434,165	+		RR42_RS31430	0.49	-1.2
2,434,294	+		RR42_RS31430	0.56	+0.0
2,434,294	+		RR42_RS31430	0.56	+0.8
2,434,294	+		RR42_RS31430	0.56	+0.8
2,434,295	-		RR42_RS31430	0.56	-0.3
2,434,463	-		RR42_RS31430	0.65	-0.9
2,434,475	-		RR42_RS31430	0.65	-2.0
2,434,528	+		RR42_RS31430	0.68	-0.6
2,434,588	+		RR42_RS31430	0.71	-0.6
2,434,588	+		RR42_RS31430	0.71	+0.7
2,434,588	+		RR42_RS31430	0.71	-0.6
2,434,610	-		RR42_RS31430	0.72	-1.8
2,434,610	-		RR42_RS31430	0.72	-2.5
2,434,610	-		RR42_RS31430	0.72	+1.2
2,434,793	-		RR42_RS31430	0.82	+0.4
2,434,795	+		RR42_RS31430	0.82	+0.9
2,434,864	+		RR42_RS31430	0.86	+0.1
2,435,194	+				-1.9
2,435,253	-		RR42_RS31435	0.23	+0.9
2,435,664	-				-0.6
2,435,761	+				+0.1
2,435,761	+				-0.3
2,435,761	+				-1.2
2,435,762	-				-1.1
2,435,762	-				-0.9
2,435,771	+				-0.1
2,435,771	+				-3.4
2,435,772	-				+0.0
2,435,813	+		RR42_RS31440	0.17	+1.7
2,435,813	+		RR42_RS31440	0.17	-1.2
2,435,813	+		RR42_RS31440	0.17	-0.2
2,435,814	-		RR42_RS31440	0.18	-0.9
2,435,814	-		RR42_RS31440	0.18	-0.6
2,435,814	-		RR42_RS31440	0.18	+0.8
2,435,814	-		RR42_RS31440	0.18	+0.8
2,435,814	-		RR42_RS31440	0.18	-2.0
2,435,814	-		RR42_RS31440	0.18	+1.6
2,435,814	-		RR42_RS31440	0.18	+0.7
2,435,814	-		RR42_RS31440	0.18	+0.4
2,436,035	-				+1.3
2,436,092	+				+1.0
2,436,093	-				-0.5
2,436,093	-				+1.5