Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31395

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,419,479	-		RR42_RS31390	0.56	+1.2
2,419,589	+		RR42_RS31390	0.67	+0.7
2,419,589	+		RR42_RS31390	0.67	-1.7
2,419,589	+		RR42_RS31390	0.67	-1.1
2,419,590	-		RR42_RS31390	0.67	+1.8
2,419,595	+		RR42_RS31390	0.67	-0.4
2,419,595	+		RR42_RS31390	0.67	+2.2
2,419,595	+		RR42_RS31390	0.67	-1.1
2,419,596	-		RR42_RS31390	0.68	-1.0
2,419,703	+		RR42_RS31390	0.79	+0.2
2,419,703	+		RR42_RS31390	0.79	-0.2
2,419,704	-		RR42_RS31390	0.79	+0.2
2,419,704	-		RR42_RS31390	0.79	+0.1
2,419,895	+				-0.4
2,419,895	+				+0.6
2,419,895	+				-1.5
2,419,896	-				+0.9
2,419,899	+				+1.1
2,419,899	+				-0.7
2,419,899	+				-0.4
2,419,899	+				+0.5
2,419,900	-				+0.8
2,419,900	-				-0.2
2,419,933	+				-1.6
2,419,941	+				-0.6
2,419,941	+				-1.1
2,419,941	+				-3.6
2,419,941	+				-0.4
2,420,068	+				+0.6
2,420,069	-				-0.8
2,420,069	-				-3.0
2,420,069	-				+0.3
2,420,098	+				+0.1
2,420,098	+				-0.3
2,420,098	+				+0.5
2,420,099	-				-3.2
2,420,175	+				-0.7
2,420,175	+				+0.6
2,420,355	+		RR42_RS31395	0.10	-1.4
2,420,356	-		RR42_RS31395	0.11	-0.2
2,420,356	-		RR42_RS31395	0.11	+0.6
2,420,425	+		RR42_RS31395	0.20	+0.6
2,420,562	+		RR42_RS31395	0.40	-2.6
2,420,562	+		RR42_RS31395	0.40	-1.8
2,420,562	+		RR42_RS31395	0.40	-0.7
2,420,562	+		RR42_RS31395	0.40	-1.9
2,420,563	-		RR42_RS31395	0.40	-1.5
2,420,563	-		RR42_RS31395	0.40	-2.8
2,420,563	-		RR42_RS31395	0.40	+0.6
2,420,563	-		RR42_RS31395	0.40	-2.4
2,420,670	-		RR42_RS31395	0.56	+1.1
2,420,748	+		RR42_RS31395	0.67	-1.1
2,420,749	-		RR42_RS31395	0.67	+0.1
2,420,838	+		RR42_RS31395	0.80	+0.8
2,420,839	-		RR42_RS31395	0.80	+0.6
2,420,857	+		RR42_RS31395	0.83	+0.3
2,420,928	+				+0.0
2,420,928	+				+1.2
2,420,929	-				+0.0
2,420,929	-				-0.9
2,420,941	+				+0.4
2,420,942	-				+0.3
2,421,056	+				-3.8
2,421,057	-				+0.2
2,421,088	-				+0.3
2,421,166	+		RR42_RS31400	0.18	-0.5
2,421,166	+		RR42_RS31400	0.18	-0.8
2,421,172	+		RR42_RS31400	0.18	-2.3
2,421,172	+		RR42_RS31400	0.18	+0.9
2,421,172	+		RR42_RS31400	0.18	+0.6
2,421,172	+		RR42_RS31400	0.18	+0.5
2,421,173	-		RR42_RS31400	0.18	-0.2
2,421,173	-		RR42_RS31400	0.18	-3.2
2,421,211	+		RR42_RS31400	0.23	-0.6
2,421,211	+		RR42_RS31400	0.23	+2.0
2,421,211	+		RR42_RS31400	0.23	-0.8
2,421,211	+		RR42_RS31400	0.23	-0.2
2,421,212	-		RR42_RS31400	0.23	+0.3
2,421,212	-		RR42_RS31400	0.23	-0.5
2,421,212	-		RR42_RS31400	0.23	-1.9
2,421,212	-		RR42_RS31400	0.23	-3.4
2,421,212	-		RR42_RS31400	0.23	+0.7
2,421,212	-		RR42_RS31400	0.23	+1.5
2,421,212	-		RR42_RS31400	0.23	-0.9
2,421,212	-		RR42_RS31400	0.23	+0.7
2,421,215	+		RR42_RS31400	0.23	-0.2
2,421,215	+		RR42_RS31400	0.23	-0.8
2,421,215	+		RR42_RS31400	0.23	+0.9
2,421,215	+		RR42_RS31400	0.23	+0.2
2,421,215	+		RR42_RS31400	0.23	+1.9
2,421,215	+		RR42_RS31400	0.23	+0.5
2,421,215	+		RR42_RS31400	0.23	+0.6
2,421,215	+		RR42_RS31400	0.23	+0.8
2,421,215	+		RR42_RS31400	0.23	+0.3
2,421,215	+		RR42_RS31400	0.23	+0.8
2,421,215	+		RR42_RS31400	0.23	+0.9
2,421,215	+		RR42_RS31400	0.23	-0.4
2,421,215	+		RR42_RS31400	0.23	+0.0
2,421,215	+		RR42_RS31400	0.23	+1.5
2,421,215	+		RR42_RS31400	0.23	-0.2
2,421,216	-		RR42_RS31400	0.23	-3.0
2,421,216	-		RR42_RS31400	0.23	-1.2
2,421,216	-		RR42_RS31400	0.23	+2.8
2,421,216	-		RR42_RS31400	0.23	-0.5
2,421,216	-		RR42_RS31400	0.23	+0.6
2,421,216	-		RR42_RS31400	0.23	+1.6
2,421,216	-		RR42_RS31400	0.23	+2.0
2,421,217	+		RR42_RS31400	0.23	-0.8
2,421,218	-		RR42_RS31400	0.23	-3.3
2,421,536	-		RR42_RS31400	0.60	+0.7
2,421,832	+				+0.7
2,421,832	+				+1.6
2,421,832	+				-1.2
2,421,833	-				-2.0
2,421,833	-				-1.8
2,421,833	-				+0.8
2,421,833	-				-1.2
2,421,853	+				-1.2
2,421,857	+				-3.1
2,421,857	+				+0.3
2,421,858	-				+0.4
2,421,937	-				+2.9