Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31035

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,342,620	+		RR42_RS31030	0.45	+0.2
2,342,620	+		RR42_RS31030	0.45	+1.8
2,342,621	-		RR42_RS31030	0.46	-0.2
2,342,621	-		RR42_RS31030	0.46	+0.2
2,342,621	-		RR42_RS31030	0.46	-0.1
2,342,747	+		RR42_RS31030	0.53	-0.7
2,342,799	-		RR42_RS31030	0.55	+1.0
2,342,806	+		RR42_RS31030	0.56	+0.4
2,342,858	-		RR42_RS31030	0.59	+0.2
2,342,858	-		RR42_RS31030	0.59	+0.3
2,342,858	-		RR42_RS31030	0.59	+0.8
2,342,984	+		RR42_RS31030	0.66	-0.5
2,343,036	-		RR42_RS31030	0.69	+0.2
2,343,036	-		RR42_RS31030	0.69	-0.8
2,343,073	+		RR42_RS31030	0.71	+0.9
2,343,073	+		RR42_RS31030	0.71	-1.2
2,343,074	-		RR42_RS31030	0.71	-0.8
2,343,074	-		RR42_RS31030	0.71	+0.3
2,343,142	+		RR42_RS31030	0.75	-0.5
2,343,142	+		RR42_RS31030	0.75	-0.2
2,343,142	+		RR42_RS31030	0.75	+0.1
2,343,142	+		RR42_RS31030	0.75	-0.5
2,343,142	+		RR42_RS31030	0.75	+0.2
2,343,143	-		RR42_RS31030	0.75	+0.4
2,343,143	-		RR42_RS31030	0.75	+0.8
2,343,143	-		RR42_RS31030	0.75	+0.2
2,343,143	-		RR42_RS31030	0.75	-2.2
2,343,143	-		RR42_RS31030	0.75	+0.5
2,343,200	-		RR42_RS31030	0.78	-3.2
2,343,264	+		RR42_RS31030	0.81	+1.2
2,343,312	-		RR42_RS31030	0.84	-2.8
2,343,341	+		RR42_RS31030	0.86	+1.4
2,343,343	+		RR42_RS31030	0.86	-0.3
2,343,344	-		RR42_RS31030	0.86	+0.2
2,343,527	-				+0.5
2,343,527	-				-0.2
2,343,590	+				+0.8
2,343,598	+				+0.3
2,343,598	+				-0.2
2,343,599	-				-0.6
2,343,599	-				+0.8
2,343,599	-				+0.2
2,343,599	-				-0.8
2,343,599	-				-0.3
2,343,786	+		RR42_RS31035	0.27	-0.9
2,343,786	+		RR42_RS31035	0.27	-1.5
2,344,003	+		RR42_RS31035	0.60	+3.1
2,344,004	-		RR42_RS31035	0.60	-0.2
2,344,258	+				-2.4
2,344,291	+				-0.4
2,344,291	+				+1.8
2,344,292	-				+0.0
2,344,292	-				-1.0
2,344,292	-				-0.4
2,344,292	-				+0.2
2,344,292	-				-0.4
2,344,292	-				+1.4
2,344,397	+				+0.5
2,344,397	+				+2.4
2,344,430	+				-1.6
2,344,430	+				-0.1
2,344,430	+				-0.2
2,344,460	-				-1.7
2,344,468	-				+0.0
2,344,709	+				+0.2
2,344,709	+				-0.4
2,344,709	+				+0.1
2,344,709	+				-0.9
2,344,709	+				+0.5
2,344,710	-				-1.1
2,344,710	-				+0.2
2,344,776	+				-1.8
2,344,776	+				-0.1
2,344,776	+				+2.9
2,344,777	-				-0.5
2,344,777	-				-0.2
2,344,871	-		RR42_RS31040	0.37	+0.2
2,344,910	-		RR42_RS31040	0.52	+0.5
2,344,910	-		RR42_RS31040	0.52	-0.8
2,344,910	-		RR42_RS31040	0.52	-0.6
2,344,910	-		RR42_RS31040	0.52	-1.3
2,345,068	-				-1.5
2,345,077	+				-0.8
2,345,077	+				+0.5
2,345,078	-				+0.1