Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30815

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,290,399	+		RR42_RS30805	0.77	-0.7
2,290,400	-		RR42_RS30805	0.77	+0.1
2,290,432	+		RR42_RS30805	0.80	+1.0
2,290,432	+		RR42_RS30805	0.80	-0.9
2,290,432	+		RR42_RS30805	0.80	-2.7
2,290,432	+		RR42_RS30805	0.80	+1.0
2,290,433	-		RR42_RS30805	0.80	+0.5
2,290,433	-		RR42_RS30805	0.80	-0.0
2,290,433	-		RR42_RS30805	0.80	-2.5
2,290,433	-		RR42_RS30805	0.80	+1.2
2,290,513	+		RR42_RS30805	0.88	+0.8
2,290,514	-		RR42_RS30805	0.88	-0.2
2,290,619	+				+0.8
2,290,619	+				-0.3
2,290,658	-				-0.4
2,290,658	-				-0.1
2,290,737	-		RR42_RS30810	0.16	-0.6
2,290,737	-		RR42_RS30810	0.16	+0.8
2,290,799	+		RR42_RS30810	0.24	-0.3
2,290,799	+		RR42_RS30810	0.24	-0.6
2,290,799	+		RR42_RS30810	0.24	+0.8
2,291,027	+		RR42_RS30810	0.56	+0.3
2,291,027	+		RR42_RS30810	0.56	+2.0
2,291,028	-		RR42_RS30810	0.56	-0.4
2,291,028	-		RR42_RS30810	0.56	-0.1
2,291,028	-		RR42_RS30810	0.56	-1.2
2,291,100	+		RR42_RS30810	0.66	-2.1
2,291,100	+		RR42_RS30810	0.66	+0.8
2,291,144	+		RR42_RS30810	0.73	+0.3
2,291,145	-		RR42_RS30810	0.73	-2.0
2,291,145	-		RR42_RS30810	0.73	-0.8
2,291,147	+		RR42_RS30810	0.73	+1.4
2,291,147	+		RR42_RS30810	0.73	-0.4
2,291,148	-		RR42_RS30810	0.73	+1.0
2,291,148	-		RR42_RS30810	0.73	+0.3
2,291,231	+		RR42_RS30810	0.85	+0.3
2,291,232	-		RR42_RS30810	0.85	+0.2
2,291,393	-				-0.2
2,291,393	-				+0.8
2,291,440	-		RR42_RS30815	0.15	+1.6
2,291,500	+		RR42_RS30815	0.24	-0.2
2,291,501	-		RR42_RS30815	0.24	+0.5
2,291,501	-		RR42_RS30815	0.24	+0.8
2,291,626	+		RR42_RS30815	0.43	+1.0
2,291,627	-		RR42_RS30815	0.43	-3.4
2,291,673	-		RR42_RS30815	0.50	+0.7
2,291,673	-		RR42_RS30815	0.50	-3.7
2,291,845	+		RR42_RS30815	0.77	+0.1
2,291,845	+		RR42_RS30815	0.77	+0.2
2,291,845	+		RR42_RS30815	0.77	+1.9
2,291,846	-		RR42_RS30815	0.77	-0.5
2,291,846	-		RR42_RS30815	0.77	+0.5
2,291,952	+				+0.4
2,291,953	-				+0.2
2,292,027	+				-1.5
2,292,027	+				+0.3
2,292,027	+				-0.5
2,292,090	-				-0.2
2,292,328	-		RR42_RS30820	0.18	-1.7
2,292,461	+		RR42_RS30820	0.28	+3.0
2,292,462	-		RR42_RS30820	0.28	-0.1
2,292,508	-		RR42_RS30820	0.32	-1.4
2,292,508	-		RR42_RS30820	0.32	-0.2
2,292,571	+		RR42_RS30820	0.37	-0.5
2,292,600	+		RR42_RS30820	0.39	+0.3
2,292,601	-		RR42_RS30820	0.39	+0.4
2,292,650	+		RR42_RS30820	0.42	-1.2
2,292,650	+		RR42_RS30820	0.42	+0.6
2,292,650	+				-1.5
2,292,994	+		RR42_RS30820	0.68	-0.6