Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30410

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,197,956	+				+1.4
2,197,957	-				+1.7
2,198,012	+				-2.4
2,198,013	-				-0.4
2,198,178	+		RR42_RS30405	0.21	-1.0
2,198,178	+		RR42_RS30405	0.21	-1.0
2,198,178	+		RR42_RS30405	0.21	-1.5
2,198,178	+		RR42_RS30405	0.21	-2.2
2,198,178	+		RR42_RS30405	0.21	-0.8
2,198,179	-		RR42_RS30405	0.21	-1.7
2,198,179	-		RR42_RS30405	0.21	-0.5
2,198,179	-		RR42_RS30405	0.21	+0.2
2,198,179	-		RR42_RS30405	0.21	+1.1
2,198,408	+		RR42_RS30405	0.53	+0.1
2,198,453	+		RR42_RS30405	0.59	-0.4
2,198,454	-		RR42_RS30405	0.59	-0.3
2,198,454	-		RR42_RS30405	0.59	-2.0
2,198,522	+		RR42_RS30405	0.69	+0.5
2,198,522	+		RR42_RS30405	0.69	-0.6
2,198,523	-		RR42_RS30405	0.69	-0.2
2,198,523	-		RR42_RS30405	0.69	+0.8
2,198,747	+				+0.2
2,198,747	+				+0.3
2,198,848	-				-0.8
2,198,984	+		RR42_RS30410	0.68	+0.2
2,198,984	+		RR42_RS30410	0.68	+2.7
2,199,052	+				-0.3
2,199,052	+				-1.5
2,199,052	+				+0.1
2,199,052	+				-1.0
2,199,052	+				+0.1
2,199,052	+				-2.6
2,199,052	+				-0.8
2,199,053	-				-0.7
2,199,053	-				-0.5
2,199,053	-				-0.7
2,199,053	-				+0.8
2,199,159	+				+0.2
2,199,159	+				+1.0
2,199,159	+				+1.2
2,199,159	+				+0.1
2,199,160	-				-1.2
2,199,160	-				+0.4
2,199,160	-				-0.6
2,199,202	+				+0.5
2,199,202	+				-0.8
2,199,203	-				+1.1
2,199,203	-				-0.4
2,199,436	+		RR42_RS30415	0.82	-0.4
2,199,436	+		RR42_RS30415	0.82	-0.0
2,199,437	-		RR42_RS30415	0.82	-1.0
2,199,437	-		RR42_RS30415	0.82	-0.5
2,199,437	-		RR42_RS30415	0.82	+0.1
2,199,437	-		RR42_RS30415	0.82	+0.6
2,199,437	-		RR42_RS30415	0.82	-0.3
2,199,437	-		RR42_RS30415	0.82	-0.5
2,199,507	+				-2.4
2,199,508	-				+1.6