Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30395

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,194,120	+		RR42_RS30390	0.70	+0.4
2,194,121	-		RR42_RS30390	0.70	-0.7
2,194,121	-		RR42_RS30390	0.70	-1.2
2,194,196	+		RR42_RS30390	0.73	-0.3
2,194,196	+		RR42_RS30390	0.73	-1.7
2,194,196	+		RR42_RS30390	0.73	+0.8
2,194,198	+		RR42_RS30390	0.73	-1.8
2,194,199	-		RR42_RS30390	0.73	+0.9
2,194,199	-		RR42_RS30390	0.73	-1.4
2,194,199	-		RR42_RS30390	0.73	+0.7
2,194,229	+		RR42_RS30390	0.74	-0.8
2,194,261	+		RR42_RS30390	0.75	-0.2
2,194,262	-		RR42_RS30390	0.75	+0.4
2,194,300	+		RR42_RS30390	0.76	-0.3
2,194,569	+		RR42_RS30390	0.85	-0.7
2,194,569	+		RR42_RS30390	0.85	+1.1
2,194,856	-				-2.8
2,195,035	+				-1.6
2,195,036	-				-0.0
2,195,036	-				+0.7
2,195,036	-				+0.8
2,195,214	-				+0.0
2,195,252	-		RR42_RS30395	0.12	+0.1
2,195,419	+		RR42_RS30395	0.25	-0.9
2,195,419	+		RR42_RS30395	0.25	-2.8
2,195,420	-		RR42_RS30395	0.25	+1.8
2,195,420	-		RR42_RS30395	0.25	-2.6
2,195,517	-		RR42_RS30395	0.33	+0.7
2,195,623	+		RR42_RS30395	0.41	-1.2
2,195,623	+		RR42_RS30395	0.41	-0.8
2,195,623	+		RR42_RS30395	0.41	-0.0
2,195,623	+		RR42_RS30395	0.41	-3.3
2,195,623	+		RR42_RS30395	0.41	-0.0
2,195,624	-		RR42_RS30395	0.41	+0.4
2,195,624	-		RR42_RS30395	0.41	+0.2
2,195,624	-		RR42_RS30395	0.41	-2.4
2,195,627	+		RR42_RS30395	0.41	-1.4
2,195,627	+		RR42_RS30395	0.41	-1.8
2,195,627	+		RR42_RS30395	0.41	+3.3
2,195,627	+		RR42_RS30395	0.41	+3.4
2,195,627	+		RR42_RS30395	0.41	+0.8
2,195,628	-		RR42_RS30395	0.41	-0.7
2,195,628	-		RR42_RS30395	0.41	+1.1
2,195,689	+		RR42_RS30395	0.46	+0.1
2,195,689	+		RR42_RS30395	0.46	+0.2
2,195,690	-		RR42_RS30395	0.46	+1.0
2,195,690	-		RR42_RS30395	0.46	-0.2
2,195,690	-		RR42_RS30395	0.46	+0.5
2,195,872	+		RR42_RS30395	0.61	-1.6
2,195,872	+		RR42_RS30395	0.61	-1.2
2,195,872	+		RR42_RS30395	0.61	-0.3
2,195,873	-		RR42_RS30395	0.61	+0.9
2,195,893	+		RR42_RS30395	0.62	+0.2
2,195,894	-		RR42_RS30395	0.62	-2.7
2,196,202	+		RR42_RS30395	0.87	-2.4
2,196,202	+		RR42_RS30395	0.87	+1.7
2,196,203	-		RR42_RS30395	0.87	-2.4
2,196,308	-				-1.8
2,196,319	+				+0.5
2,196,320	-				-1.6
2,196,320	-				-1.8
2,196,320	-				-0.1
2,196,330	+				+1.7
2,196,330	+				+1.1
2,196,330	+				-1.2
2,196,330	+				+0.8
2,196,331	-				+0.5
2,196,447	+				+1.4
2,196,447	+				+0.1
2,196,448	-				+1.4
2,196,448	-				+0.1
2,196,448	-				-1.6
2,196,634	+				-0.8
2,196,634	+				+0.8
2,196,634	+				+0.2
2,196,679	+				-0.1
2,196,680	-				+0.0
2,196,862	+		RR42_RS30400	0.19	-0.5
2,196,862	+		RR42_RS30400	0.19	+2.0
2,196,862	+		RR42_RS30400	0.19	-0.5
2,196,862	+		RR42_RS30400	0.19	-0.9
2,196,863	-		RR42_RS30400	0.19	+1.4
2,196,863	-		RR42_RS30400	0.19	-0.9
2,196,864	+		RR42_RS30400	0.19	+0.4
2,196,931	+		RR42_RS30400	0.24	-0.9
2,196,931	+		RR42_RS30400	0.24	+0.2
2,196,931	+		RR42_RS30400	0.24	+0.6
2,196,932	-		RR42_RS30400	0.24	-0.4
2,196,932	-		RR42_RS30400	0.24	+0.5
2,196,932	-		RR42_RS30400	0.24	+0.1
2,197,073	-		RR42_RS30400	0.36	+0.3
2,197,073	-		RR42_RS30400	0.36	+0.8
2,197,073	-		RR42_RS30400	0.36	+0.2
2,197,073	-		RR42_RS30400	0.36	+3.2
2,197,096	+		RR42_RS30400	0.38	+1.4
2,197,097	-		RR42_RS30400	0.38	-0.7
2,197,097	-		RR42_RS30400	0.38	-1.0
2,197,285	+		RR42_RS30400	0.53	-0.2
2,197,286	-		RR42_RS30400	0.53	-2.0
2,197,286	-		RR42_RS30400	0.53	-1.5