Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30080

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,119,415	+		RR42_RS30075	0.17	-0.7
2,119,415	+		RR42_RS30075	0.17	+0.1
2,119,416	-		RR42_RS30075	0.17	+1.0
2,119,416	-		RR42_RS30075	0.17	+0.7
2,119,416	-		RR42_RS30075	0.17	-0.3
2,119,416	-		RR42_RS30075	0.17	-0.3
2,119,523	-		RR42_RS30075	0.28	+0.7
2,119,523	-		RR42_RS30075	0.28	+0.6
2,119,613	+		RR42_RS30075	0.37	+0.3
2,119,614	-		RR42_RS30075	0.37	+1.4
2,119,614	-		RR42_RS30075	0.37	-1.2
2,119,690	-		RR42_RS30075	0.45	-0.5
2,119,690	-		RR42_RS30075	0.45	+0.7
2,119,739	+		RR42_RS30075	0.50	+1.1
2,119,739	+		RR42_RS30075	0.50	-3.4
2,119,811	+		RR42_RS30075	0.57	-1.3
2,120,013	-		RR42_RS30075	0.77	+0.7
2,120,037	+		RR42_RS30075	0.80	-0.3
2,120,109	-		RR42_RS30075	0.87	+0.9
2,120,232	+				-3.3
2,120,232	+				-2.6
2,120,232	+				+1.4
2,120,233	-				-0.0
2,120,235	-				-1.3
2,120,254	+				-3.2
2,120,255	-				-2.2
2,120,255	-				-0.3
2,120,418	+				+0.1
2,120,418	+				+2.0
2,120,418	+				-0.6
2,120,418	+				+0.5
2,120,418	+				+0.0
2,120,419	-				+0.7
2,120,419	-				-0.8
2,120,425	+				+1.4
2,120,426	-				-0.3
2,120,426	-				-0.1
2,120,457	+				+1.6
2,120,457	+				+0.5
2,120,457	+				-0.7
2,120,457	+				-1.3
2,120,458	-		RR42_RS30080	0.10	-0.1
2,120,458	-		RR42_RS30080	0.10	+0.6
2,120,516	+		RR42_RS30080	0.14	-0.1
2,120,565	+		RR42_RS30080	0.18	+1.7
2,120,566	-		RR42_RS30080	0.18	+1.6
2,120,623	+		RR42_RS30080	0.22	-0.1
2,120,624	-		RR42_RS30080	0.22	-0.1
2,120,824	-		RR42_RS30080	0.36	+1.1
2,120,824	-		RR42_RS30080	0.36	+0.2
2,120,824	-		RR42_RS30080	0.36	+2.1
2,121,083	-		RR42_RS30080	0.55	+1.6
2,121,105	+		RR42_RS30080	0.57	+0.2
2,121,106	-		RR42_RS30080	0.57	-0.1
2,121,128	+		RR42_RS30080	0.58	-2.2
2,121,141	+		RR42_RS30080	0.59	-0.4
2,121,141	+		RR42_RS30080	0.59	+0.7
2,121,141	+		RR42_RS30080	0.59	-0.1
2,121,229	-		RR42_RS30080	0.66	+0.3
2,121,229	-		RR42_RS30080	0.66	+1.1
2,121,229	-		RR42_RS30080	0.66	-1.3
2,121,278	+		RR42_RS30080	0.69	+0.7
2,121,283	+		RR42_RS30080	0.69	-0.3
2,121,283	+		RR42_RS30080	0.69	-0.7
2,121,283	+		RR42_RS30080	0.69	+0.4
2,121,284	-		RR42_RS30080	0.69	+3.3
2,121,284	-		RR42_RS30080	0.69	+0.6
2,121,284	-		RR42_RS30080	0.69	-0.8
2,121,318	-		RR42_RS30080	0.72	+1.0
2,121,452	-		RR42_RS30080	0.82	+0.4
2,121,524	+		RR42_RS30080	0.87	-0.1
2,121,528	-		RR42_RS30080	0.87	-1.3
2,121,528	-		RR42_RS30080	0.87	-1.6
2,121,620	+				+0.2
2,121,651	+				-0.8
2,121,775	+		RR42_RS30085	0.14	-1.0
2,121,776	-		RR42_RS30085	0.14	+0.3
2,121,940	+		RR42_RS30085	0.59	-0.1
2,121,941	-		RR42_RS30085	0.59	+0.9
2,121,941	-		RR42_RS30085	0.59	+0.7
2,122,083	+				-0.0
2,122,084	-				+0.3
2,122,084	-				+0.5
2,122,084	-				+1.1
2,122,109	-				-0.3
2,122,119	+				+1.3
2,122,119	+				-0.1
2,122,120	-				-0.1
2,122,123	+				-2.1
2,122,162	+				-1.2
2,122,239	-				-0.4
2,122,239	-				-1.6
2,122,374	-				-0.8
2,122,527	-				+0.7
2,122,535	-				+1.2