Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30040

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,110,603	+		RR42_RS30035	0.37	-0.1
2,110,603	+		RR42_RS30035	0.37	+0.4
2,110,604	-		RR42_RS30035	0.38	+0.1
2,110,657	+		RR42_RS30035	0.43	-1.8
2,110,657	+		RR42_RS30035	0.43	-1.7
2,110,658	-		RR42_RS30035	0.43	+0.4
2,110,931	+		RR42_RS30035	0.69	-0.7
2,110,932	-		RR42_RS30035	0.69	+0.7
2,111,017	+		RR42_RS30035	0.77	+0.9
2,111,018	-		RR42_RS30035	0.77	-1.2
2,111,070	+		RR42_RS30035	0.82	-0.8
2,111,070	+		RR42_RS30035	0.82	+1.3
2,111,071	-		RR42_RS30035	0.82	+0.3
2,111,119	+		RR42_RS30035	0.87	+0.6
2,111,119	+		RR42_RS30035	0.87	+0.5
2,111,120	-		RR42_RS30035	0.87	+0.6
2,111,120	-		RR42_RS30035	0.87	+2.2
2,111,385	-				+0.4
2,111,385	-				-0.8
2,111,385	-				+0.1
2,111,385	-				-1.0
2,111,385	-				-3.6
2,111,385	-				+3.8
2,111,414	+				-0.2
2,111,414	+				-3.3
2,111,414	+				+0.5
2,111,415	-				+0.1
2,111,417	-				+0.4
2,111,417	-				-0.1
2,111,708	+		RR42_RS30040	0.23	-2.3
2,111,981	-		RR42_RS30040	0.37	+1.6
2,111,981	-		RR42_RS30040	0.37	-0.6
2,111,981	-		RR42_RS30040	0.37	+1.6
2,112,299	-		RR42_RS30040	0.52	-0.0
2,112,299	-		RR42_RS30040	0.52	+1.1
2,112,357	-		RR42_RS30040	0.55	-0.5
2,112,366	-		RR42_RS30040	0.56	+0.4
2,112,394	+		RR42_RS30040	0.57	-0.0
2,112,394	+		RR42_RS30040	0.57	+0.3
2,112,394	+		RR42_RS30040	0.57	+0.0
2,112,394	+		RR42_RS30040	0.57	-0.6
2,112,395	-		RR42_RS30040	0.57	+0.7
2,112,395	-		RR42_RS30040	0.57	-0.8
2,112,395	-		RR42_RS30040	0.57	-0.8
2,112,395	-		RR42_RS30040	0.57	+1.2
2,112,413	+		RR42_RS30040	0.58	+0.6
2,112,414	-		RR42_RS30040	0.58	+0.1
2,112,426	+		RR42_RS30040	0.59	+0.9
2,112,515	+		RR42_RS30040	0.63	-1.4
2,112,515	+		RR42_RS30040	0.63	-1.2
2,112,515	+		RR42_RS30040	0.63	-1.0
2,112,516	-		RR42_RS30040	0.63	+0.1
2,112,516	-		RR42_RS30040	0.63	+0.6
2,112,516	-		RR42_RS30040	0.63	-0.2
2,112,516	-		RR42_RS30040	0.63	-0.6
2,112,516	-		RR42_RS30040	0.63	-4.5
2,112,516	-		RR42_RS30040	0.63	-3.3
2,112,516	-		RR42_RS30040	0.63	+0.4
2,112,516	-		RR42_RS30040	0.63	-0.2
2,112,597	+		RR42_RS30040	0.67	-2.6
2,112,617	+		RR42_RS30040	0.68	-3.2
2,112,647	+		RR42_RS30040	0.69	-0.6
2,112,648	-		RR42_RS30040	0.70	-0.2
2,112,648	-		RR42_RS30040	0.70	-0.6
2,112,648	-		RR42_RS30040	0.70	+0.9
2,112,741	-		RR42_RS30040	0.74	-0.5
2,112,741	-		RR42_RS30040	0.74	+0.3
2,113,242	-				-1.5
2,113,510	-		RR42_RS30045	0.17	-0.3
2,113,620	+		RR42_RS30045	0.24	-1.7
2,113,620	+		RR42_RS30045	0.24	-0.1
2,113,821	-		RR42_RS30045	0.37	-1.8
2,113,876	-		RR42_RS30045	0.41	+0.5
2,113,876	-		RR42_RS30045	0.41	-2.0
2,114,070	+		RR42_RS30045	0.53	+0.5
2,114,097	-		RR42_RS30045	0.55	-0.3
2,114,097	-		RR42_RS30045	0.55	+1.0