Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29815

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,052,701	+				+0.4
2,052,701	+				-0.3
2,052,701	+				+0.7
2,052,702	-				-0.3
2,052,833	+				-3.0
2,052,834	-				+2.0
2,052,836	+				+0.5
2,052,836	+				+0.3
2,052,837	-				+0.4
2,052,837	-				+0.1
2,052,837	-				-1.6
2,052,837	-				-0.5
2,052,837	-				-0.0
2,052,837	-				+1.4
2,052,902	+				+1.2
2,052,902	+				+0.1
2,052,903	-				+0.0
2,052,925	+				-0.3
2,052,925	+				+0.3
2,052,932	+				-0.8
2,052,933	-				+0.3
2,052,933	-				-0.1
2,052,933	-				-0.3
2,052,975	+				+0.5
2,052,975	+				+0.2
2,052,975	+				+1.1
2,052,975	+				+2.3
2,052,975	+				-0.1
2,052,975	+				-0.4
2,052,976	-				+1.1
2,052,976	-				-2.5
2,052,976	-				-0.5
2,053,021	+				-0.1
2,053,022	-				+0.5
2,053,022	-				-0.8
2,053,022	-				+0.9
2,053,022	-				-0.2
2,053,022	-				-1.2
2,053,022	-				-0.2
2,053,022	-				-0.6
2,053,077	+				-0.0
2,053,111	+				-0.1
2,053,111	+				+0.9
2,053,119	+				+1.9
2,053,119	+				+1.7
2,053,119	+				-0.1
2,053,228	+		RR42_RS29810	0.12	+1.3
2,053,387	+		RR42_RS29810	0.51	-1.3
2,053,387	+		RR42_RS29810	0.51	-1.2
2,053,388	-		RR42_RS29810	0.52	-0.2
2,053,414	-		RR42_RS29810	0.58	-0.0
2,053,434	-		RR42_RS29810	0.63	+0.3
2,053,434	-		RR42_RS29810	0.63	-2.4
2,053,480	-		RR42_RS29810	0.74	-0.5
2,053,500	+		RR42_RS29810	0.79	+0.4
2,053,518	+		RR42_RS29810	0.84	-0.1
2,053,518	+		RR42_RS29810	0.84	+1.0
2,053,518	+		RR42_RS29810	0.84	+0.7
2,053,518	+		RR42_RS29810	0.84	-1.2
2,053,518	+		RR42_RS29810	0.84	-1.2
2,053,518	+		RR42_RS29810	0.84	+1.3
2,053,519	-		RR42_RS29810	0.84	-1.7
2,053,519	-		RR42_RS29810	0.84	-0.1
2,053,519	-		RR42_RS29810	0.84	-0.8
2,053,519	-		RR42_RS29810	0.84	-0.6
2,053,519	-		RR42_RS29810	0.84	-0.4
2,053,519	-		RR42_RS29810	0.84	+0.6
2,053,519	-		RR42_RS29810	0.84	+0.2
2,053,519	-		RR42_RS29810	0.84	+1.0
2,053,532	-		RR42_RS29810	0.87	+0.6
2,053,532	-		RR42_RS29810	0.87	+0.4
2,053,563	-				-0.8
2,053,563	-				+0.0
2,053,563	-				-0.8
2,053,563	-				-0.4
2,053,564	+				+0.2
2,053,564	+				+2.2
2,053,564	+				-0.2
2,053,565	-				+1.0
2,053,565	-				+0.2
2,053,565	-				+2.0
2,053,601	-				-0.1
2,053,799	-		RR42_RS29815	0.13	-0.4
2,053,803	+		RR42_RS29815	0.13	-2.4
2,053,803	+		RR42_RS29815	0.13	+0.3
2,053,803	+		RR42_RS29815	0.13	-0.9
2,053,804	-		RR42_RS29815	0.13	-0.2
2,053,810	+		RR42_RS29815	0.14	-3.3
2,053,810	+		RR42_RS29815	0.14	+0.2
2,053,810	+		RR42_RS29815	0.14	+0.7
2,053,899	+		RR42_RS29815	0.25	-0.3
2,053,900	-		RR42_RS29815	0.25	-1.1
2,053,912	+		RR42_RS29815	0.26	+0.5
2,053,913	-		RR42_RS29815	0.26	+1.6
2,053,913	-		RR42_RS29815	0.26	-0.3
2,053,913	-		RR42_RS29815	0.26	-0.4
2,053,914	+		RR42_RS29815	0.26	-0.8
2,053,914	+		RR42_RS29815	0.26	+0.7
2,053,915	-		RR42_RS29815	0.26	+0.2
2,053,915	-		RR42_RS29815	0.26	+0.4
2,053,915	-		RR42_RS29815	0.26	-1.0
2,053,915	-		RR42_RS29815	0.26	-2.8
2,053,957	+		RR42_RS29815	0.31	+1.0
2,053,957	+		RR42_RS29815	0.31	-1.3
2,053,958	-		RR42_RS29815	0.31	-0.3
2,053,968	+		RR42_RS29815	0.33	-1.3
2,053,968	+		RR42_RS29815	0.33	-0.4
2,053,968	+		RR42_RS29815	0.33	-0.3
2,053,969	-		RR42_RS29815	0.33	-0.3
2,053,969	-		RR42_RS29815	0.33	-0.3
2,053,969	-		RR42_RS29815	0.33	-0.4
2,054,022	+		RR42_RS29815	0.39	+0.8
2,054,229	+		RR42_RS29815	0.63	+0.2
2,054,229	+		RR42_RS29815	0.63	+0.5
2,054,233	-		RR42_RS29815	0.63	-0.7
2,054,319	+		RR42_RS29815	0.73	+0.5
2,054,319	+		RR42_RS29815	0.73	+0.0
2,054,319	+		RR42_RS29815	0.73	-0.1
2,054,319	+		RR42_RS29815	0.73	-0.0
2,054,319	+		RR42_RS29815	0.73	+0.0
2,054,319	+		RR42_RS29815	0.73	-0.7
2,054,320	-		RR42_RS29815	0.73	-2.7
2,054,367	+		RR42_RS29815	0.79	+0.7
2,054,367	+		RR42_RS29815	0.79	+0.5
2,054,368	-		RR42_RS29815	0.79	+0.7
2,054,368	-		RR42_RS29815	0.79	-1.7
2,054,428	+		RR42_RS29815	0.86	-0.6
2,054,528	+				+1.1
2,054,528	+				+1.5
2,054,529	-				-1.6
2,054,551	+				-0.4
2,054,566	+				-0.4
2,054,697	+				-1.0
2,054,697	+				-0.9
2,054,697	+				+0.6
2,054,709	+				+0.0
2,054,710	-				-0.7
2,054,730	+				-0.8
2,054,731	-				-1.6
2,054,731	-				-0.2
2,054,783	+		RR42_RS29820	0.11	+0.1
2,054,784	-		RR42_RS29820	0.11	-2.6
2,054,806	-		RR42_RS29820	0.13	-0.3
2,054,806	-		RR42_RS29820	0.13	+0.2
2,054,806	-		RR42_RS29820	0.13	+1.0
2,054,976	+		RR42_RS29820	0.30	+0.3
2,054,977	-		RR42_RS29820	0.30	+0.1
2,054,999	-		RR42_RS29820	0.32	+1.6
2,055,013	+		RR42_RS29820	0.34	-1.4
2,055,014	-		RR42_RS29820	0.34	-0.3
2,055,026	+		RR42_RS29820	0.35	-0.4
2,055,026	+		RR42_RS29820	0.35	+0.9
2,055,027	-		RR42_RS29820	0.35	+1.0
2,055,192	+		RR42_RS29820	0.52	-1.4
2,055,192	+		RR42_RS29820	0.52	+0.5
2,055,192	+		RR42_RS29820	0.52	-1.7
2,055,193	-		RR42_RS29820	0.52	+0.1
2,055,201	+		RR42_RS29820	0.53	+0.7
2,055,201	+		RR42_RS29820	0.53	+0.3
2,055,201	+		RR42_RS29820	0.53	+0.3
2,055,201	+		RR42_RS29820	0.53	+0.8
2,055,202	-		RR42_RS29820	0.53	-0.1
2,055,202	-		RR42_RS29820	0.53	-0.6
2,055,202	-		RR42_RS29820	0.53	+0.1
2,055,298	+		RR42_RS29820	0.62	-2.1
2,055,298	+		RR42_RS29820	0.62	-3.6
2,055,502	+		RR42_RS29820	0.83	-0.9
2,055,503	-		RR42_RS29820	0.83	+0.5
2,055,503	-		RR42_RS29820	0.83	-0.4
2,055,537	+		RR42_RS29820	0.86	-1.6
2,055,537	+		RR42_RS29820	0.86	-0.3
2,055,542	-		RR42_RS29820	0.87	+2.2