Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29060

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,874,387	+		RR42_RS29055	0.17	+0.7
1,874,389	+		RR42_RS29055	0.17	+1.7
1,874,389	+		RR42_RS29055	0.17	+0.3
1,874,390	-		RR42_RS29055	0.17	+0.2
1,874,390	-		RR42_RS29055	0.17	-1.6
1,874,390	-		RR42_RS29055	0.17	-2.3
1,874,390	-		RR42_RS29055	0.17	+1.3
1,874,791	+		RR42_RS29055	0.61	+1.2
1,874,792	-		RR42_RS29055	0.61	+0.5
1,874,849	-		RR42_RS29055	0.67	-0.1
1,874,849	-		RR42_RS29055	0.67	+0.1
1,874,864	+		RR42_RS29055	0.69	+0.8
1,874,865	-		RR42_RS29055	0.69	+0.5
1,874,865	-		RR42_RS29055	0.69	+0.9
1,874,936	+		RR42_RS29055	0.77	-4.0
1,874,936	+		RR42_RS29055	0.77	-0.4
1,874,998	+		RR42_RS29055	0.83	+0.1
1,874,999	-		RR42_RS29055	0.83	-0.3
1,874,999	-		RR42_RS29055	0.83	-0.7
1,874,999	-		RR42_RS29055	0.83	-2.3
1,875,121	+				-1.3
1,875,121	+				+0.0
1,875,131	-				-0.3
1,875,131	-				-2.8
1,875,285	-				+0.8
1,875,285	-				+0.9
1,875,350	+				-1.6
1,875,351	-				-1.1
1,875,707	+		RR42_RS29060	0.41	+0.0
1,875,707	+		RR42_RS29060	0.41	+0.6
1,875,707	+		RR42_RS29060	0.41	-0.2
1,875,708	-		RR42_RS29060	0.41	-1.3
1,875,824	+		RR42_RS29060	0.53	+0.4
1,875,933	-		RR42_RS29060	0.63	-0.6
1,875,947	+		RR42_RS29060	0.65	+0.8
1,875,948	-		RR42_RS29060	0.65	-0.6
1,875,948	-		RR42_RS29060	0.65	-1.4
1,875,948	-		RR42_RS29060	0.65	-1.3
1,875,995	+		RR42_RS29060	0.69	-0.8
1,876,290	+				+0.9
1,876,290	+				+0.9
1,876,290	+				-1.4
1,876,290	+				-1.1
1,876,290	+				-0.1
1,876,290	+				-0.0
1,876,291	-				+0.7
1,876,291	-				-0.6
1,876,335	-				-0.8
1,876,540	+		RR42_RS29065	0.23	-0.8
1,876,541	-		RR42_RS29065	0.23	-2.3
1,876,548	+		RR42_RS29065	0.24	+0.2
1,876,578	+		RR42_RS29065	0.26	-1.4
1,876,578	+		RR42_RS29065	0.26	-0.0
1,876,951	+		RR42_RS29065	0.63	+0.7
1,876,964	-		RR42_RS29065	0.64	-0.7
1,877,017	+		RR42_RS29065	0.69	-0.1
1,877,027	-		RR42_RS29065	0.70	-1.4
1,877,227	+		RR42_RS29065	0.89	-2.0
1,877,228	-		RR42_RS29065	0.89	+0.6
1,877,228	-		RR42_RS29065	0.89	-0.5