Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29045

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,870,599	+				-0.3
1,870,599	+				+0.6
1,870,599	+				-0.8
1,870,599	+				+0.7
1,870,599	+				-0.8
1,870,599	+				+0.7
1,870,600	-				-0.1
1,870,600	-				-0.0
1,870,600	-				-0.6
1,870,600	-				-0.5
1,870,600	-				+1.1
1,870,601	+				+1.2
1,870,602	-				-0.3
1,870,602	-				-0.8
1,870,602	-				+0.2
1,870,603	+				+0.4
1,870,604	-				-0.4
1,870,841	+				+0.5
1,870,841	+				-0.9
1,870,842	-				+0.7
1,870,842	-				-2.1
1,870,845	+				-1.1
1,870,846	-				-1.8
1,870,846	-				-2.6
1,870,852	-				-1.2
1,870,934	+		RR42_RS29040	0.18	+3.1
1,871,048	+		RR42_RS29040	0.42	-1.8
1,871,186	+		RR42_RS29040	0.72	-2.3
1,871,186	+		RR42_RS29040	0.72	-1.2
1,871,187	-		RR42_RS29040	0.72	-1.3
1,871,187	-		RR42_RS29040	0.72	-0.6
1,871,432	+				-1.4
1,871,500	-				-0.4
1,871,684	-		RR42_RS29045	0.20	+2.7
1,871,684	-		RR42_RS29045	0.20	+0.3
1,871,728	+		RR42_RS29045	0.24	+0.6
1,871,729	-		RR42_RS29045	0.24	-0.1
1,871,830	+		RR42_RS29045	0.35	+0.5
1,871,887	+		RR42_RS29045	0.41	-1.6
1,872,127	+		RR42_RS29045	0.66	-0.1
1,872,128	-		RR42_RS29045	0.66	-2.1
1,872,172	+		RR42_RS29045	0.70	+0.1
1,872,172	+		RR42_RS29045	0.70	-1.6
1,872,172	+		RR42_RS29045	0.70	+0.6
1,872,173	-		RR42_RS29045	0.71	+0.8
1,872,173	-		RR42_RS29045	0.71	+0.6
1,872,173	-		RR42_RS29045	0.71	+1.3
1,872,173	-		RR42_RS29045	0.71	-0.6
1,872,251	-		RR42_RS29045	0.79	-0.3
1,872,289	+		RR42_RS29045	0.83	-0.0
1,872,289	+		RR42_RS29045	0.83	+2.7
1,872,293	-		RR42_RS29045	0.83	-1.1
1,872,293	-		RR42_RS29045	0.83	-0.7
1,872,299	-		RR42_RS29045	0.84	-1.2
1,872,299	-		RR42_RS29045	0.84	+0.2
1,872,454	+				-0.2
1,872,455	-				+0.6
1,872,455	-				-1.0
1,872,501	+				-2.6
1,872,502	-				+0.7
1,872,506	+				+0.2
1,872,507	-				+0.6
1,872,507	-				+1.3
1,872,507	-				+1.3
1,872,507	-				+1.0
1,872,625	+				+0.2
1,872,651	+				-1.9
1,872,868	-		RR42_RS29050	0.15	-0.3
1,872,868	-		RR42_RS29050	0.15	+1.0
1,872,927	+		RR42_RS29050	0.18	-0.5
1,872,928	-		RR42_RS29050	0.18	-0.1
1,872,928	-		RR42_RS29050	0.18	+0.4
1,873,054	+		RR42_RS29050	0.26	+1.8
1,873,055	-		RR42_RS29050	0.26	-2.6
1,873,083	+		RR42_RS29050	0.28	-0.7
1,873,083	+		RR42_RS29050	0.28	+0.3
1,873,182	-		RR42_RS29050	0.34	+0.1
1,873,215	+		RR42_RS29050	0.36	-0.5
1,873,216	-		RR42_RS29050	0.36	-0.6
1,873,436	+		RR42_RS29050	0.50	+0.9