Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28150

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,671,754	+		RR42_RS28145	0.21	-1.2
1,671,754	+		RR42_RS28145	0.21	-1.1
1,671,938	+		RR42_RS28145	0.43	+0.5
1,672,038	+		RR42_RS28145	0.54	-0.2
1,672,147	+		RR42_RS28145	0.67	-0.8
1,672,469	-				+0.2
1,672,470	+				-2.6
1,672,470	+				+1.1
1,672,506	-				+0.3
1,672,616	+				-0.8
1,672,616	+				-0.2
1,672,778	+		RR42_RS28150	0.11	-0.3
1,672,779	-		RR42_RS28150	0.11	-0.4
1,672,779	-		RR42_RS28150	0.11	-1.0
1,672,851	-		RR42_RS28150	0.16	+0.2
1,673,012	+		RR42_RS28150	0.28	+0.4
1,673,013	-		RR42_RS28150	0.28	+0.1
1,673,013	-		RR42_RS28150	0.28	-0.4
1,673,160	+		RR42_RS28150	0.39	+0.1
1,673,169	-		RR42_RS28150	0.39	+0.8
1,673,169	-		RR42_RS28150	0.39	+1.8
1,673,169	-		RR42_RS28150	0.39	+0.8
1,673,339	+		RR42_RS28150	0.51	+0.1
1,673,339	+		RR42_RS28150	0.51	+0.1
1,673,339	+		RR42_RS28150	0.51	-1.8
1,673,340	-		RR42_RS28150	0.51	-1.5
1,673,498	+		RR42_RS28150	0.63	-1.2
1,673,628	+		RR42_RS28150	0.72	-1.0
1,673,628	+		RR42_RS28150	0.72	+0.3
1,673,629	-		RR42_RS28150	0.72	-1.9
1,673,629	-		RR42_RS28150	0.72	+0.3
1,673,898	-				-0.2
1,673,914	+				+0.5
1,674,003	+				-0.3
1,674,344	+		RR42_RS28155	0.70	+1.1
1,674,345	-		RR42_RS28155	0.70	-0.1
1,674,497	+				+0.3
1,674,630	+		RR42_RS28160	0.13	+1.3
1,674,630	+		RR42_RS28160	0.13	+0.2
1,674,630	+		RR42_RS28160	0.13	+0.3
1,674,631	-		RR42_RS28160	0.13	+0.4
1,674,795	+		RR42_RS28160	0.37	+0.4
1,674,795	+		RR42_RS28160	0.37	+0.4
1,674,795	+		RR42_RS28160	0.37	+2.0
1,674,795	+		RR42_RS28160	0.37	+0.4
1,674,796	-		RR42_RS28160	0.37	-0.8
1,674,796	-		RR42_RS28160	0.37	-0.5
1,674,796	-		RR42_RS28160	0.37	-0.1
1,674,796	-		RR42_RS28160	0.37	-2.6
1,674,796	-		RR42_RS28160	0.37	-0.6
1,674,796	-		RR42_RS28160	0.37	-2.6
1,674,796	-		RR42_RS28160	0.37	-1.8
1,674,796	-		RR42_RS28160	0.37	-0.2
1,674,850	+		RR42_RS28160	0.45	-0.3
1,674,851	-		RR42_RS28160	0.45	+0.6
1,674,851	-		RR42_RS28160	0.45	+0.5
1,674,852	+		RR42_RS28160	0.45	+0.6
1,674,852	+		RR42_RS28160	0.45	-0.8