Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27610

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,557,357	+				-0.1
1,557,357	+				+0.2
1,557,357	+				-1.4
1,557,417	+				+0.3
1,557,417	+				+0.0
1,557,417	+				-2.1
1,557,490	+		RR42_RS27605	0.10	+0.4
1,557,491	-		RR42_RS27605	0.10	-2.6
1,557,623	+		RR42_RS27605	0.26	+0.0
1,557,635	+		RR42_RS27605	0.28	+0.1
1,557,636	-		RR42_RS27605	0.28	+0.2
1,558,192	+				+0.9
1,558,193	-				+0.0
1,558,277	-				-3.5
1,558,309	-				+1.4
1,558,309	-				+0.9
1,558,309	-				+0.8
1,558,402	+				+1.0
1,558,403	-				-1.1
1,558,429	+		RR42_RS27610	0.11	-0.5
1,558,430	-		RR42_RS27610	0.11	+0.6
1,558,459	+		RR42_RS27610	0.13	-0.3
1,558,577	-		RR42_RS27610	0.23	+1.1
1,558,739	-		RR42_RS27610	0.35	+0.2
1,558,786	+		RR42_RS27610	0.39	-2.5
1,558,786	+		RR42_RS27610	0.39	+0.7
1,558,787	-		RR42_RS27610	0.39	+0.9
1,558,817	+		RR42_RS27610	0.41	-1.5
1,558,818	-		RR42_RS27610	0.42	-0.8
1,558,828	+		RR42_RS27610	0.42	-1.2
1,558,904	+		RR42_RS27610	0.48	+0.4
1,558,905	-		RR42_RS27610	0.48	+0.5
1,558,966	+		RR42_RS27610	0.53	+0.5
1,558,966	+		RR42_RS27610	0.53	+0.7
1,558,967	-		RR42_RS27610	0.53	+0.4
1,558,967	-		RR42_RS27610	0.53	-0.3
1,559,078	-		RR42_RS27610	0.62	-1.1
1,559,192	-		RR42_RS27610	0.71	+0.5
1,559,255	-		RR42_RS27610	0.76	+0.0
1,559,386	+		RR42_RS27610	0.86	+1.0
1,559,387	-		RR42_RS27610	0.86	-0.6
1,559,387	-		RR42_RS27610	0.86	+0.4
1,559,394	+		RR42_RS27610	0.87	+0.1
1,559,461	+				+0.9
1,559,472	+				+3.3
1,559,473	-				+0.3
1,559,473	-				+1.7
1,559,473	-				+0.6
1,559,473	-				-2.4
1,559,473	-				-0.7
1,559,474	+				+1.1
1,559,475	-				-0.6
1,559,475	-				+0.1
1,559,475	-				-1.1
1,559,506	+				+0.5
1,559,507	-				+0.1
1,559,534	-				+0.9
1,559,564	+				+1.0
1,559,633	+				+0.6
1,559,634	-				-1.0
1,559,634	-				-0.4
1,559,708	+				-1.2
1,559,709	-				-2.4
1,560,096	+		RR42_RS27615	0.30	+0.6
1,560,097	-		RR42_RS27615	0.30	-0.3
1,560,097	-		RR42_RS27615	0.30	-1.1
1,560,097	-		RR42_RS27615	0.30	+1.2
1,560,147	+		RR42_RS27615	0.36	+0.5
1,560,147	+		RR42_RS27615	0.36	-0.4
1,560,147	+		RR42_RS27615	0.36	-2.0
1,560,148	-		RR42_RS27615	0.36	+0.6
1,560,393	+		RR42_RS27615	0.63	-0.4
1,560,496	-		RR42_RS27615	0.75	+0.7