Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27060
Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM |
---|---|---|---|---|---|
remove | |||||
1,423,439 | - | RR42_RS27055 | 0.79 | -0.5 | |
1,423,439 | - | RR42_RS27055 | 0.79 | -0.2 | |
1,423,694 | - | RR42_RS27055 | 0.87 | -1.2 | |
1,423,700 | - | RR42_RS27055 | 0.87 | +0.6 | |
1,423,977 | - | -2.9 | |||
1,424,026 | + | -0.3 | |||
1,424,114 | - | -1.3 | |||
1,424,114 | - | -2.0 | |||
1,424,736 | - | RR42_RS27060 | 0.55 | +0.4 | |
1,425,123 | + | RR42_RS27060 | 0.89 | +0.5 | |
1,425,124 | - | RR42_RS27060 | 0.89 | +0.6 | |
1,425,189 | + | -4.0 | |||
1,425,881 | + | RR42_RS27065 | 0.68 | -0.4 | |
1,425,993 | + | -0.1 | |||
1,426,150 | + | RR42_RS27070 | 0.18 | +0.5 | |
1,426,150 | + | RR42_RS27070 | 0.18 | -2.1 | |
1,426,151 | - | RR42_RS27070 | 0.18 | -1.3 | |
1,426,151 | - | RR42_RS27070 | 0.18 | -4.4 | |
1,426,151 | - | RR42_RS27070 | 0.18 | -0.7 |
Or see this region's nucleotide sequence