Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26525

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,306,545	+				+0.5
1,306,546	-				-0.0
1,306,546	-				-1.7
1,306,563	+				+0.8
1,306,563	+				-0.0
1,306,563	+				-2.9
1,306,564	-				-1.0
1,306,564	-				-0.6
1,306,564	-				+1.7
1,306,564	-				-2.9
1,306,588	+				+0.3
1,306,588	+				+0.9
1,306,623	-				+0.2
1,306,623	-				+0.8
1,306,672	+				-0.7
1,306,672	+				+1.2
1,306,672	+				+1.5
1,306,672	+				+1.1
1,306,672	+				+0.7
1,306,672	+				-0.5
1,306,672	+				+0.1
1,306,672	+				-0.9
1,306,673	-				+0.4
1,306,673	-				+0.2
1,306,944	+		RR42_RS26520	0.44	+0.7
1,306,945	-		RR42_RS26520	0.44	+0.1
1,306,960	+		RR42_RS26520	0.46	+0.6
1,306,960	+		RR42_RS26520	0.46	+0.8
1,306,964	+		RR42_RS26520	0.47	+1.4
1,306,964	+		RR42_RS26520	0.47	+1.0
1,306,964	+		RR42_RS26520	0.47	-0.7
1,306,964	+		RR42_RS26520	0.47	-0.7
1,306,964	+		RR42_RS26520	0.47	-0.7
1,306,964	+		RR42_RS26520	0.47	+0.2
1,306,964	+		RR42_RS26520	0.47	+0.7
1,306,964	+		RR42_RS26520	0.47	+0.4
1,306,964	+		RR42_RS26520	0.47	-0.4
1,306,964	+		RR42_RS26520	0.47	-1.2
1,306,965	-		RR42_RS26520	0.47	-0.6
1,306,965	-		RR42_RS26520	0.47	+1.9
1,306,965	-		RR42_RS26520	0.47	+0.2
1,306,965	-		RR42_RS26520	0.47	+1.8
1,306,965	-		RR42_RS26520	0.47	-0.2
1,306,965	-		RR42_RS26520	0.47	+1.7
1,306,965	-		RR42_RS26520	0.47	-0.2
1,306,965	-		RR42_RS26520	0.47	+1.4
1,306,965	-		RR42_RS26520	0.47	-0.1
1,307,042	-		RR42_RS26520	0.59	-0.5
1,307,050	+		RR42_RS26520	0.60	+0.8
1,307,051	-		RR42_RS26520	0.61	+0.7
1,307,051	-		RR42_RS26520	0.61	-3.2
1,307,277	+				+0.8
1,307,277	+				-0.8
1,307,277	+				+0.7
1,307,278	-				+0.3
1,307,278	-				+2.0
1,307,278	-				+0.9
1,307,278	-				+0.3
1,307,304	+				-1.0
1,307,305	-				-0.2
1,307,569	+				+1.4
1,307,569	+				-0.1
1,307,569	+				-2.9
1,307,569	+				+0.5
1,307,570	-				+0.0
1,307,570	-				+1.3
1,307,703	+		RR42_RS26525	0.26	+0.5
1,307,747	-		RR42_RS26525	0.32	-0.4
1,307,770	+		RR42_RS26525	0.35	-0.1
1,307,923	+		RR42_RS26525	0.55	-0.9
1,307,924	-		RR42_RS26525	0.55	-2.1
1,308,007	+		RR42_RS26525	0.65	-0.4
1,308,008	-		RR42_RS26525	0.66	-1.1
1,308,073	+		RR42_RS26525	0.74	+0.3
1,308,119	+		RR42_RS26525	0.80	-0.2
1,308,119	+		RR42_RS26525	0.80	-1.0
1,308,119	+		RR42_RS26525	0.80	-2.2
1,308,119	+		RR42_RS26525	0.80	+1.2
1,308,120	-		RR42_RS26525	0.80	+0.3
1,308,643	+		RR42_RS26530	0.27	+0.7
1,308,643	+		RR42_RS26530	0.27	+0.0
1,308,644	-		RR42_RS26530	0.27	+0.5
1,308,695	-		RR42_RS26530	0.32	-0.7
1,308,709	+		RR42_RS26530	0.34	+0.5
1,308,728	+		RR42_RS26530	0.35	-0.3
1,308,730	-		RR42_RS26530	0.36	+0.6
1,308,790	+		RR42_RS26530	0.42	+0.4
1,308,934	+		RR42_RS26530	0.57	+0.6
1,308,934	+		RR42_RS26530	0.57	-1.1
1,308,934	+		RR42_RS26530	0.57	-0.9
1,308,935	-		RR42_RS26530	0.57	-0.7
1,308,935	-		RR42_RS26530	0.57	+0.7
1,308,988	+		RR42_RS26530	0.62	+0.2
1,308,988	+		RR42_RS26530	0.62	+0.4
1,308,988	+		RR42_RS26530	0.62	+0.7
1,308,989	-		RR42_RS26530	0.62	+0.7
1,308,989	-		RR42_RS26530	0.62	-0.2
1,308,989	-		RR42_RS26530	0.62	-1.1
1,309,020	+		RR42_RS26530	0.65	-1.9
1,309,260	-				-0.7
1,309,260	-				-1.5