Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25835

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,133,891	+				+0.6
1,133,891	+				-0.7
1,133,892	-				-0.1
1,133,899	-				-3.1
1,133,905	-				+0.9
1,133,914	-				-0.9
1,133,949	-				-2.2
1,133,996	-		RR42_RS25830	0.14	-2.6
1,134,313	-		RR42_RS25830	0.45	+1.1
1,134,313	-		RR42_RS25830	0.45	-0.6
1,134,378	+		RR42_RS25830	0.51	+0.3
1,134,378	+		RR42_RS25830	0.51	+0.2
1,134,451	+		RR42_RS25830	0.58	-0.1
1,134,452	-		RR42_RS25830	0.58	-2.9
1,134,453	+		RR42_RS25830	0.58	-0.6
1,134,453	+		RR42_RS25830	0.58	+1.2
1,134,454	-		RR42_RS25830	0.59	-0.4
1,134,454	-		RR42_RS25830	0.59	-2.3
1,134,454	-		RR42_RS25830	0.59	-0.6
1,134,454	-		RR42_RS25830	0.59	-2.4
1,134,454	-		RR42_RS25830	0.59	-0.5
1,134,801	+				-0.6
1,134,802	-				-0.5
1,134,802	-				+1.1
1,134,989	+				-0.1
1,134,990	-				+0.6
1,135,010	+				-0.2
1,135,010	+				+0.8
1,135,011	-				-1.7
1,135,011	-				+1.0
1,135,011	-				-0.7
1,135,023	-		RR42_RS25835	0.11	+0.2
1,135,023	-		RR42_RS25835	0.11	+0.5
1,135,023	-		RR42_RS25835	0.11	+0.1
1,135,095	-		RR42_RS25835	0.16	-1.9
1,135,104	-		RR42_RS25835	0.17	+0.2
1,135,104	-		RR42_RS25835	0.17	-1.6
1,135,130	+		RR42_RS25835	0.19	+1.9
1,135,130	+		RR42_RS25835	0.19	-0.1
1,135,181	-		RR42_RS25835	0.22	-1.7
1,135,371	-		RR42_RS25835	0.36	+1.3
1,135,692	+		RR42_RS25835	0.59	+0.6
1,135,693	-		RR42_RS25835	0.59	-1.0
1,135,693	-		RR42_RS25835	0.59	-2.7
1,135,693	-		RR42_RS25835	0.59	+0.9
1,135,693	-		RR42_RS25835	0.59	-3.4
1,135,866	+		RR42_RS25835	0.72	+1.2
1,135,867	-		RR42_RS25835	0.72	+0.1
1,135,992	+		RR42_RS25835	0.81	+1.5
1,135,992	+		RR42_RS25835	0.81	+2.9
1,135,995	-		RR42_RS25835	0.81	+0.6
1,136,121	+				+0.2
1,136,121	+				+1.1
1,136,122	-				+0.4
1,136,259	+				-0.5
1,136,260	-				+0.5
1,136,469	+		RR42_RS25840	0.34	+0.1
1,136,470	-		RR42_RS25840	0.34	-0.5
1,136,470	-		RR42_RS25840	0.34	-3.1
1,136,470	-		RR42_RS25840	0.34	-2.6
1,136,470	-		RR42_RS25840	0.34	-1.2
1,136,631	+		RR42_RS25840	0.60	-1.0
1,136,632	-		RR42_RS25840	0.61	+0.0
1,136,784	+		RR42_RS25840	0.85	-1.7
1,136,784	+		RR42_RS25840	0.85	+1.0
1,136,785	-		RR42_RS25840	0.85	-0.9
1,136,914	-				-3.4
1,137,035	+				+0.1
1,137,217	+				-0.4
1,137,217	+				+0.4
1,137,217	+				+0.1
1,137,217	+				+0.3
1,137,218	-				+0.8
1,137,218	-				-2.3
1,137,253	+				-0.6
1,137,253	+				+0.9