Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25755

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,117,634	+				-2.4
1,117,634	+				-1.2
1,117,635	-				-0.7
1,117,635	-				-1.5
1,117,635	-				-0.5
1,117,753	+				-3.1
1,117,753	+				-0.2
1,117,753	+				-0.4
1,117,753	+				-0.1
1,117,754	-				+0.9
1,117,754	-				-0.2
1,117,754	-				+1.0
1,118,022	+		RR42_RS25750	0.35	+0.2
1,118,022	+		RR42_RS25750	0.35	-2.7
1,118,023	-		RR42_RS25750	0.35	+0.2
1,118,157	+		RR42_RS25750	0.51	-0.3
1,118,157	+		RR42_RS25750	0.51	+1.6
1,118,157	+		RR42_RS25750	0.51	+0.9
1,118,158	-		RR42_RS25750	0.51	+0.9
1,118,286	+		RR42_RS25750	0.67	-0.7
1,118,287	-		RR42_RS25750	0.67	+1.7
1,118,298	+		RR42_RS25750	0.68	+0.1
1,118,304	+		RR42_RS25750	0.69	-2.3
1,118,304	+		RR42_RS25750	0.69	-1.6
1,118,305	-		RR42_RS25750	0.69	-0.3
1,118,319	+		RR42_RS25750	0.71	+0.4
1,118,322	+		RR42_RS25750	0.71	+0.8
1,118,323	-		RR42_RS25750	0.71	+1.3
1,118,323	-		RR42_RS25750	0.71	+0.5
1,118,323	-		RR42_RS25750	0.71	+0.7
1,118,328	+		RR42_RS25750	0.72	-0.5
1,118,328	+		RR42_RS25750	0.72	+0.5
1,118,328	+		RR42_RS25750	0.72	+1.1
1,118,329	-		RR42_RS25750	0.72	-1.7
1,118,329	-		RR42_RS25750	0.72	-1.5
1,118,473	-		RR42_RS25750	0.90	-0.7
1,118,852	-		RR42_RS25755	0.31	-2.3
1,118,991	-		RR42_RS25755	0.48	-0.6
1,119,031	+		RR42_RS25755	0.52	-0.8
1,119,064	+		RR42_RS25755	0.56	-0.1
1,119,501	+				+0.7
1,119,502	-				+1.3
1,119,502	-				+0.9
1,119,517	+				-0.1
1,119,518	-				-1.4
1,119,518	-				-1.0
1,119,518	-				+1.3
1,119,518	-				-1.6
1,119,523	+				+0.3
1,119,523	+				+1.6
1,119,524	-				-0.2
1,119,675	+		RR42_RS25760	0.16	+0.2
1,119,675	+		RR42_RS25760	0.16	-1.3
1,119,675	+		RR42_RS25760	0.16	+1.4
1,119,676	-		RR42_RS25760	0.17	+0.2
1,119,796	+		RR42_RS25760	0.27	-0.5
1,119,796	+		RR42_RS25760	0.27	+0.3
1,119,796	+		RR42_RS25760	0.27	-0.6
1,119,797	-		RR42_RS25760	0.27	-0.3
1,119,797	-		RR42_RS25760	0.27	-0.7
1,119,797	-		RR42_RS25760	0.27	-0.3
1,119,813	+		RR42_RS25760	0.29	+3.5
1,119,814	-		RR42_RS25760	0.29	+0.0
1,119,814	-		RR42_RS25760	0.29	+0.3
1,119,814	-		RR42_RS25760	0.29	+0.2
1,119,814	-		RR42_RS25760	0.29	-0.4
1,119,865	+		RR42_RS25760	0.33	-0.1
1,119,866	-		RR42_RS25760	0.33	-1.0
1,119,948	-		RR42_RS25760	0.41	-0.6
1,120,076	-		RR42_RS25760	0.52	-1.7