Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25745

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,116,513	+				+0.0
1,116,543	+		RR42_RS25740	0.11	+1.0
1,116,623	-		RR42_RS25740	0.22	+0.8
1,116,837	-		RR42_RS25740	0.50	+0.1
1,116,848	+		RR42_RS25740	0.52	+0.4
1,116,849	-		RR42_RS25740	0.52	+0.8
1,116,849	-		RR42_RS25740	0.52	-1.9
1,117,235	-				-0.7
1,117,283	+				+2.2
1,117,390	+				-4.2
1,117,479	-				-0.7
1,117,483	+				-1.7
1,117,483	+				+0.1
1,117,634	+				-2.4
1,117,634	+				-1.2
1,117,635	-				-0.7
1,117,635	-				-1.5
1,117,635	-				-0.5
1,117,753	+				-3.1
1,117,753	+				-0.2
1,117,753	+				-0.4
1,117,753	+				-0.1
1,117,754	-				+0.9
1,117,754	-				-0.2
1,117,754	-				+1.0
1,118,022	+		RR42_RS25750	0.35	+0.2
1,118,022	+		RR42_RS25750	0.35	-2.7
1,118,023	-		RR42_RS25750	0.35	+0.2
1,118,157	+		RR42_RS25750	0.51	-0.3
1,118,157	+		RR42_RS25750	0.51	+1.6
1,118,157	+		RR42_RS25750	0.51	+0.9
1,118,158	-		RR42_RS25750	0.51	+0.9
1,118,286	+		RR42_RS25750	0.67	-0.7
1,118,287	-		RR42_RS25750	0.67	+1.7
1,118,298	+		RR42_RS25750	0.68	+0.1
1,118,304	+		RR42_RS25750	0.69	-2.3
1,118,304	+		RR42_RS25750	0.69	-1.6
1,118,305	-		RR42_RS25750	0.69	-0.3
1,118,319	+		RR42_RS25750	0.71	+0.4
1,118,322	+		RR42_RS25750	0.71	+0.8
1,118,323	-		RR42_RS25750	0.71	+1.3
1,118,323	-		RR42_RS25750	0.71	+0.5
1,118,323	-		RR42_RS25750	0.71	+0.7
1,118,328	+		RR42_RS25750	0.72	-0.5
1,118,328	+		RR42_RS25750	0.72	+0.5
1,118,328	+		RR42_RS25750	0.72	+1.1
1,118,329	-		RR42_RS25750	0.72	-1.7
1,118,329	-		RR42_RS25750	0.72	-1.5
1,118,473	-		RR42_RS25750	0.90	-0.7