Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25640

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,096,302	+		RR42_RS25640	0.24	+0.9
1,096,302	+		RR42_RS25640	0.24	-4.1
1,097,089	+				-0.8
1,097,089	+				+0.6
1,097,089	+				-0.4
1,097,097	-				+0.9
1,097,250	+		RR42_RS25645	0.79	+0.9
1,097,250	+		RR42_RS25645	0.79	+0.8
1,097,251	-		RR42_RS25645	0.80	+0.2
1,097,251	-		RR42_RS25645	0.80	-0.4
1,097,294	+				+0.2
1,097,295	-				-3.6
1,097,295	-				-0.1
1,097,295	-				-0.1
1,097,338	+				-0.5
1,097,338	+				-0.1
1,097,338	+				+2.1
1,097,339	-				-0.8
1,097,339	-				-2.8
1,097,460	-				-2.4
1,097,610	-				+0.8
1,097,610	-				-0.2
1,097,610	-				-0.2
1,097,613	-				+0.1
1,097,613	-				-0.0
1,097,704	+		RR42_RS25650	0.49	-0.4
1,097,704	+		RR42_RS25650	0.49	+1.9
1,097,798	+				-0.6
1,097,799	-				+0.3
1,097,799	-				+0.5
1,097,901	+				-0.0
1,097,908	+				+1.0
1,097,908	+				-0.3