Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS21355
Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM |
---|---|---|---|---|---|
remove | |||||
119,413 | - | RR42_RS21350 | 0.43 | +0.8 | |
119,413 | - | RR42_RS21350 | 0.43 | -0.9 | |
119,811 | + | RR42_RS21350 | 0.68 | -0.7 | |
119,839 | - | RR42_RS21350 | 0.70 | +0.3 | |
119,869 | - | RR42_RS21350 | 0.72 | -1.5 | |
119,979 | + | RR42_RS21350 | 0.79 | +0.1 | |
119,980 | - | RR42_RS21350 | 0.79 | -0.2 | |
119,985 | + | RR42_RS21350 | 0.79 | +0.6 | |
119,986 | - | RR42_RS21350 | 0.79 | +1.1 | |
120,025 | - | RR42_RS21350 | 0.82 | -0.5 | |
120,025 | - | RR42_RS21350 | 0.82 | -2.2 | |
120,150 | + | RR42_RS21350 | 0.90 | +0.7 | |
120,151 | - | RR42_RS21350 | 0.90 | -0.7 | |
120,311 | - | -1.4 | |||
120,311 | - | -0.5 | |||
120,326 | + | -1.9 | |||
120,327 | - | +0.4 | |||
120,640 | + | RR42_RS21355 | 0.25 | +0.2 | |
120,830 | - | RR42_RS21355 | 0.44 | -2.7 | |
121,016 | - | RR42_RS21355 | 0.62 | -1.2 | |
121,016 | - | RR42_RS21355 | 0.62 | -0.0 | |
121,150 | - | RR42_RS21355 | 0.76 | +0.1 | |
121,411 | - | -0.2 | |||
121,803 | + | RR42_RS21360 | 0.49 | +0.7 | |
121,804 | - | RR42_RS21360 | 0.49 | +0.4 | |
122,268 | - | -0.3 | |||
122,348 | - | +0.6 | |||
122,348 | - | -0.4 |
Or see this region's nucleotide sequence