Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20345

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
4,399,968	-				-2.4
4,400,142	+		RR42_RS20340	0.17	-0.2
4,400,519	+		RR42_RS20340	0.58	-2.6
4,400,520	-		RR42_RS20340	0.58	+0.6
4,400,582	+		RR42_RS20340	0.65	-1.8
4,400,583	-		RR42_RS20340	0.65	-1.8
4,400,609	+		RR42_RS20340	0.68	-1.6
4,400,610	-		RR42_RS20340	0.68	-1.9
4,400,817	-				+0.6
4,400,817	-				+0.3
4,400,817	-				-0.7
4,400,817	-				+0.4
4,400,822	+				+0.6
4,400,822	+				-2.6
4,400,823	-				+0.4
4,400,823	-				-0.1
4,400,906	+				+0.6
4,400,907	-				+0.7
4,401,266	-		RR42_RS20345	0.16	-2.8
4,401,481	-		RR42_RS20345	0.25	+2.1
4,401,631	-		RR42_RS20345	0.32	-0.8
4,401,729	+		RR42_RS20345	0.37	-1.1
4,401,790	-		RR42_RS20345	0.39	+1.2
4,401,790	-		RR42_RS20345	0.39	-1.8
4,401,792	+		RR42_RS20345	0.40	-0.4
4,401,793	-		RR42_RS20345	0.40	+0.3
4,401,885	-		RR42_RS20345	0.44	-0.8
4,401,933	+		RR42_RS20345	0.46	-0.8
4,401,934	-		RR42_RS20345	0.46	+2.5
4,401,960	+		RR42_RS20345	0.47	-2.2
4,401,960	+		RR42_RS20345	0.47	+0.8
4,401,961	-		RR42_RS20345	0.47	+0.6
4,401,961	-		RR42_RS20345	0.47	-1.9
4,402,054	-		RR42_RS20345	0.51	+0.4
4,402,054	-		RR42_RS20345	0.51	+0.0
4,402,146	+		RR42_RS20345	0.56	-0.4
4,402,146	+		RR42_RS20345	0.56	+1.7
4,402,146	+		RR42_RS20345	0.56	-0.3
4,402,147	-		RR42_RS20345	0.56	+0.2
4,402,322	+		RR42_RS20345	0.64	+0.6
4,402,323	-		RR42_RS20345	0.64	+1.6
4,402,560	+		RR42_RS20345	0.74	+0.1
4,402,561	-		RR42_RS20345	0.74	+0.6
4,402,561	-		RR42_RS20345	0.74	+1.2
4,402,633	-		RR42_RS20345	0.78	-0.5
4,402,861	-		RR42_RS20345	0.88	-1.1
4,402,861	-		RR42_RS20345	0.88	+0.1
4,403,205	+		RR42_RS20350	0.12	-1.1
4,403,342	+		RR42_RS20350	0.31	-1.4
4,403,343	-		RR42_RS20350	0.31	+2.2
4,403,748	-		RR42_RS20350	0.89	+0.9
4,403,868	+				-2.0
4,403,868	+				+0.2
4,403,881	+				-0.0
4,403,881	+				+0.4
4,403,974	+				-0.6
4,403,974	+				+0.7
4,403,975	-				-2.1
4,403,980	+				-1.9
4,403,981	-				-0.0
4,403,981	-				-1.9