Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20060

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
4,333,852	+				-0.6
4,333,852	+				-1.2
4,333,983	+				+1.2
4,333,984	-				-0.2
4,334,053	+				+0.7
4,334,054	-				-1.5
4,334,164	+				+2.2
4,334,164	+				-0.4
4,334,164	+				+0.3
4,334,165	-				+0.2
4,334,165	-				+2.1
4,334,165	-				+2.2
4,334,176	+				+1.9
4,334,177	-				-0.6
4,334,177	-				+0.5
4,334,222	-				-0.4
4,334,326	-				+0.8
4,334,386	+				-0.1
4,334,386	+				+1.8
4,334,387	-				-0.1
4,334,387	-				+0.2
4,334,387	-				+1.2
4,334,387	-				+0.3
4,334,387	-				+0.8
4,334,551	+		RR42_RS20060	0.22	+0.7
4,334,551	+		RR42_RS20060	0.22	+0.6
4,334,551	+		RR42_RS20060	0.22	+0.7
4,334,552	-		RR42_RS20060	0.22	+1.9
4,334,552	-		RR42_RS20060	0.22	+1.4
4,334,661	+		RR42_RS20060	0.32	+1.2
4,334,661	+		RR42_RS20060	0.32	+1.4
4,334,662	-		RR42_RS20060	0.32	-0.1
4,334,697	+		RR42_RS20060	0.35	-0.0
4,334,698	-		RR42_RS20060	0.35	-0.1
4,334,908	-		RR42_RS20060	0.54	-0.8
4,335,047	-		RR42_RS20060	0.66	+1.6
4,335,394	-				+1.1
4,335,562	+				-0.1
4,335,562	+				+0.5
4,335,563	-				+1.2
4,335,745	+		RR42_RS20065	0.54	+1.0
4,335,745	+		RR42_RS20065	0.54	+1.8
4,335,745	+		RR42_RS20065	0.54	-0.6
4,335,745	+		RR42_RS20065	0.54	-2.8
4,335,745	+		RR42_RS20065	0.54	+0.8
4,335,746	-		RR42_RS20065	0.55	-0.4
4,335,895	+				+1.0
4,335,895	+				+0.4
4,335,895	+				+0.4
4,335,895	+				+1.2
4,335,896	-				+0.7
4,335,897	+				+1.5
4,335,897	+				+0.7
4,335,897	+				-1.1
4,336,330	-		RR42_RS20070	0.11	+0.6
4,336,332	+		RR42_RS20070	0.11	-1.1
4,336,332	+		RR42_RS20070	0.11	+0.2
4,336,332	+		RR42_RS20070	0.11	-0.0
4,336,332	+		RR42_RS20070	0.11	+0.3
4,336,332	+		RR42_RS20070	0.11	-3.3
4,336,332	+		RR42_RS20070	0.11	-1.1
4,336,333	-		RR42_RS20070	0.11	+0.4
4,336,333	-		RR42_RS20070	0.11	-1.1
4,336,333	-		RR42_RS20070	0.11	-0.4
4,336,390	-		RR42_RS20070	0.13	+0.8
4,336,399	-		RR42_RS20070	0.13	+0.9