Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20020

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
4,323,324	-				+0.0
4,323,324	-				+1.7
4,323,556	-				-0.5
4,323,625	+				-1.0
4,323,626	-				+0.1
4,323,651	-				-1.3
4,323,775	-				+1.8
4,323,818	-				+1.5
4,323,818	-				+1.6
4,323,818	-				+0.8
4,323,818	-				+1.7
4,323,924	+				-0.5
4,323,935	+				-0.4
4,323,935	+				+2.4
4,323,936	-				+2.2
4,324,035	+				+0.8
4,324,039	-				-0.1
4,324,093	+				-0.3
4,324,093	+				+0.7
4,324,093	+				+1.7
4,324,093	+				+1.1
4,324,093	+				+0.2
4,324,093	+				+1.0
4,324,093	+				+0.0
4,324,093	+				-0.8
4,324,094	-				+3.0
4,324,145	+				+1.2
4,324,145	+				+1.4
4,324,146	-				+1.0
4,324,311	-		RR42_RS20020	0.19	+1.6
4,324,407	+		RR42_RS20020	0.30	+0.7
4,324,408	-		RR42_RS20020	0.30	+1.2
4,324,408	-		RR42_RS20020	0.30	-1.0
4,324,408	-		RR42_RS20020	0.30	+0.7
4,324,408	-		RR42_RS20020	0.30	+2.2
4,324,408	-		RR42_RS20020	0.30	-0.1
4,324,461	+		RR42_RS20020	0.36	-0.1
4,324,462	-		RR42_RS20020	0.36	+3.6
4,324,579	-		RR42_RS20020	0.49	-0.3
4,324,611	+		RR42_RS20020	0.53	+2.7
4,324,611	+		RR42_RS20020	0.53	-0.4
4,324,611	+		RR42_RS20020	0.53	+0.1
4,324,809	+		RR42_RS20020	0.75	+0.5
4,324,809	+		RR42_RS20020	0.75	+0.1
4,325,004	+				+0.5
4,325,004	+				+0.5
4,325,004	+				-1.6
4,325,004	+				-2.3
4,325,004	+				+0.2
4,325,004	+				-0.5
4,325,005	-				+0.6
4,325,026	-				+0.5
4,325,109	-				-0.9
4,325,133	+				-0.4
4,325,134	-				+0.7
4,325,480	+		RR42_RS20025	0.24	-0.2
4,325,480	+		RR42_RS20025	0.24	+0.3
4,325,481	-		RR42_RS20025	0.24	-3.2
4,325,483	+		RR42_RS20025	0.24	-2.3
4,325,483	+		RR42_RS20025	0.24	+0.4
4,325,484	-		RR42_RS20025	0.24	-2.1
4,325,484	-		RR42_RS20025	0.24	+0.3
4,325,513	+		RR42_RS20025	0.26	+0.4
4,325,583	-		RR42_RS20025	0.31	-0.6
4,325,583	-		RR42_RS20025	0.31	+0.4
4,325,669	+		RR42_RS20025	0.36	-0.3
4,325,669	+		RR42_RS20025	0.36	-0.3
4,325,669	+		RR42_RS20025	0.36	+1.0
4,325,669	+		RR42_RS20025	0.36	-0.5
4,325,669	+		RR42_RS20025	0.36	+1.1
4,325,670	-		RR42_RS20025	0.36	+0.5
4,325,670	-		RR42_RS20025	0.36	+1.2
4,325,670	-		RR42_RS20025	0.36	-1.8
4,325,670	-		RR42_RS20025	0.36	+1.9
4,325,670	-		RR42_RS20025	0.36	+0.5
4,325,675	+		RR42_RS20025	0.36	+0.4
4,325,795	+		RR42_RS20025	0.44	+2.9
4,325,801	+		RR42_RS20025	0.44	-0.6
4,325,802	-		RR42_RS20025	0.44	+0.7
4,325,885	+		RR42_RS20025	0.50	-0.0
4,325,886	-		RR42_RS20025	0.50	-2.3
4,325,886	-		RR42_RS20025	0.50	-4.0