Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19910

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
4,298,710	-		RR42_RS19900	0.25	+2.6
4,299,094	+				-0.4
4,299,106	+				+0.9
4,299,107	-				-0.3
4,299,178	+		RR42_RS19905	0.10	-0.2
4,299,178	+		RR42_RS19905	0.10	+0.2
4,299,179	-		RR42_RS19905	0.10	+0.6
4,299,179	-		RR42_RS19905	0.10	-2.7
4,299,179	-		RR42_RS19905	0.10	+0.6
4,299,273	+		RR42_RS19905	0.35	-1.6
4,299,286	+		RR42_RS19905	0.39	-0.8
4,299,287	-		RR42_RS19905	0.39	+1.1
4,299,299	-		RR42_RS19905	0.42	-0.1
4,299,299	-		RR42_RS19905	0.42	+0.7
4,299,403	-		RR42_RS19905	0.70	+0.3
4,299,682	+				-0.3
4,299,682	+				+0.4
4,299,682	+				-0.5
4,299,682	+				+0.6
4,299,683	-				+1.0
4,299,835	+				+0.4
4,299,835	+				+0.7
4,299,876	-		RR42_RS19910	0.11	-1.2
4,300,130	-		RR42_RS19910	0.28	+1.0
4,300,130	-		RR42_RS19910	0.28	-0.6
4,300,157	-		RR42_RS19910	0.30	-2.6
4,300,157	-		RR42_RS19910	0.30	+0.6
4,300,157	-		RR42_RS19910	0.30	-0.9
4,300,273	+		RR42_RS19910	0.38	+1.6
4,300,274	-		RR42_RS19910	0.38	+0.2
4,300,274	-		RR42_RS19910	0.38	+0.6
4,300,339	+		RR42_RS19910	0.42	+0.5
4,300,636	+		RR42_RS19910	0.61	-1.6
4,300,636	+		RR42_RS19910	0.61	+0.7
4,300,637	-		RR42_RS19910	0.61	+0.6
4,300,792	+		RR42_RS19910	0.72	-1.4
4,300,792	+		RR42_RS19910	0.72	-1.1
4,300,810	+		RR42_RS19910	0.73	-0.4
4,300,811	-		RR42_RS19910	0.73	-0.2
4,300,909	+		RR42_RS19910	0.79	+1.2
4,300,909	+		RR42_RS19910	0.79	+0.2
4,300,910	-		RR42_RS19910	0.79	-2.1
4,300,910	-		RR42_RS19910	0.79	-1.7
4,300,910	-		RR42_RS19910	0.79	+1.3
4,300,963	+		RR42_RS19910	0.83	-0.9
4,300,964	-		RR42_RS19910	0.83	+1.4
4,301,068	+		RR42_RS19910	0.90	-1.6
4,301,069	-		RR42_RS19910	0.90	+0.3
4,301,226	+				-2.9
4,301,234	-				+0.5
4,301,542	+		RR42_RS19915	0.29	+0.7
4,301,543	-		RR42_RS19915	0.29	+0.3
4,301,562	-		RR42_RS19915	0.31	+1.1
4,301,586	-		RR42_RS19915	0.33	-2.0
4,301,646	-		RR42_RS19915	0.39	+0.9
4,301,662	+		RR42_RS19915	0.40	+1.2
4,301,743	-		RR42_RS19915	0.48	+1.4
4,301,822	-		RR42_RS19915	0.56	+0.5
4,301,851	+		RR42_RS19915	0.59	+1.0
4,301,851	+		RR42_RS19915	0.59	+2.2
4,301,851	+		RR42_RS19915	0.59	-2.2
4,301,852	-		RR42_RS19915	0.59	+0.1
4,301,878	+		RR42_RS19915	0.61	-1.6
4,301,884	+		RR42_RS19915	0.62	+1.4
4,301,884	+		RR42_RS19915	0.62	+2.2
4,301,885	-		RR42_RS19915	0.62	-0.0
4,301,992	+		RR42_RS19915	0.72	-0.2
4,301,992	+		RR42_RS19915	0.72	-1.9
4,301,992	+		RR42_RS19915	0.72	-0.5
4,301,993	-		RR42_RS19915	0.72	+0.3
4,301,993	-		RR42_RS19915	0.72	-0.5
4,301,993	-		RR42_RS19915	0.72	-0.9
4,302,044	-		RR42_RS19915	0.77	-0.0
4,302,044	-		RR42_RS19915	0.77	-0.8
4,302,194	-				+1.0
4,302,208	-				+0.9