Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19575

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
4,229,714	+		RR42_RS19565	0.89	+0.5
4,229,715	-		RR42_RS19565	0.89	-1.9
4,229,715	-		RR42_RS19565	0.89	+1.2
4,229,858	+				-0.3
4,229,858	+				+0.4
4,229,858	+				+1.7
4,229,858	+				+0.8
4,229,858	+				+0.2
4,229,858	+				-2.0
4,229,859	-				-0.2
4,229,859	-				-0.8
4,229,989	-				-0.1
4,230,023	+				+0.8
4,230,023	+				-1.1
4,230,245	+		RR42_RS19570	0.47	+1.4
4,230,576	-				-0.8
4,230,601	+				-0.1
4,230,601	+				+1.2
4,230,601	+				+0.0
4,230,601	+				+0.3
4,230,601	+				-1.1
4,230,601	+				-0.8
4,230,601	+				-1.4
4,230,601	+				-1.0
4,230,602	-				+0.8
4,230,602	-				-0.1
4,230,635	+				-0.9
4,230,635	+				+2.2
4,230,636	-				+0.1
4,230,636	-				+0.7
4,230,636	-				-1.0
4,230,656	-				+0.2
4,230,656	-				+1.4
4,230,656	-				-0.5
4,230,728	-		RR42_RS19575	0.18	+0.0
4,230,850	+		RR42_RS19575	0.38	-1.1
4,230,851	-		RR42_RS19575	0.38	-0.3
4,230,851	-		RR42_RS19575	0.38	-0.8
4,230,851	-		RR42_RS19575	0.38	+2.7
4,230,853	+		RR42_RS19575	0.39	-0.9
4,230,854	-		RR42_RS19575	0.39	+1.5
4,230,988	-		RR42_RS19575	0.61	-0.1
4,230,994	+		RR42_RS19575	0.62	-1.2
4,230,995	-		RR42_RS19575	0.62	-0.8
4,230,995	-		RR42_RS19575	0.62	-0.7
4,230,995	-		RR42_RS19575	0.62	-0.9
4,231,355	-				+1.1
4,231,355	-				+0.1
4,231,355	-				+0.8
4,231,406	+				-0.6
4,231,407	-				-1.4
4,231,598	+		RR42_RS19580	0.49	-0.7
4,231,599	-		RR42_RS19580	0.50	-1.8
4,231,599	-		RR42_RS19580	0.50	+0.6
4,231,601	+		RR42_RS19580	0.50	-0.4
4,231,602	-		RR42_RS19580	0.50	-0.6
4,231,742	+		RR42_RS19580	0.84	-1.1
4,231,743	-		RR42_RS19580	0.84	+0.4
4,231,877	-				+0.8
4,231,907	+		RR42_RS19585	0.17	-1.2
4,231,907	+		RR42_RS19585	0.17	+1.4
4,231,907	+		RR42_RS19585	0.17	-0.3
4,231,907	+		RR42_RS19585	0.17	+0.1
4,231,907	+		RR42_RS19585	0.17	-0.8
4,231,907	+		RR42_RS19585	0.17	-1.5
4,231,908	-		RR42_RS19585	0.17	-0.9
4,231,908	-		RR42_RS19585	0.17	-0.8
4,231,998	+		RR42_RS19585	0.39	+0.3
4,231,998	+		RR42_RS19585	0.39	-2.3
4,231,999	-		RR42_RS19585	0.39	-0.4
4,231,999	-		RR42_RS19585	0.39	-1.9
4,232,189	+		RR42_RS19585	0.85	-0.4
4,232,189	+		RR42_RS19585	0.85	+0.7
4,232,189	+		RR42_RS19585	0.85	+0.1
4,232,189	+		RR42_RS19585	0.85	+0.2
4,232,189	+		RR42_RS19585	0.85	-0.7
4,232,189	+		RR42_RS19585	0.85	+2.2
4,232,190	-		RR42_RS19585	0.85	+0.3
4,232,190	-		RR42_RS19585	0.85	-3.1