Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18215

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,946,301	-		RR42_RS18210	0.60	+0.7
3,946,343	-		RR42_RS18210	0.63	+0.8
3,946,343	-		RR42_RS18210	0.63	-0.2
3,946,501	+		RR42_RS18210	0.73	+1.3
3,946,501	+		RR42_RS18210	0.73	+0.5
3,946,502	-		RR42_RS18210	0.73	-3.2
3,946,502	-		RR42_RS18210	0.73	+0.1
3,946,541	-		RR42_RS18210	0.76	+0.3
3,946,786	+				-1.5
3,946,786	+				-0.6
3,946,787	-				+3.5
3,946,787	-				+0.3
3,946,787	-				-1.0
3,946,965	+				-0.8
3,946,965	+				-1.6
3,946,965	+				+0.3
3,946,965	+				-1.9
3,946,966	-				+1.7
3,946,966	-				-0.8
3,946,966	-				+0.4
3,946,968	+				+0.1
3,946,969	-				+0.1
3,946,969	-				+0.1
3,946,969	-				-0.7
3,946,969	-				-0.3
3,946,985	+				-0.3
3,946,986	-				-0.1
3,947,196	-				-0.5
3,947,205	+				+0.4
3,947,206	-				-0.6
3,947,585	+		RR42_RS18215	0.29	+0.1
3,947,585	+		RR42_RS18215	0.29	+0.6
3,947,586	-		RR42_RS18215	0.29	+0.2
3,947,586	-		RR42_RS18215	0.29	+1.7
3,947,974	+		RR42_RS18215	0.61	-1.0
3,947,975	-		RR42_RS18215	0.62	+0.2
3,947,975	-		RR42_RS18215	0.62	+2.9
3,948,122	+		RR42_RS18215	0.74	+0.5
3,948,273	-		RR42_RS18215	0.87	-1.2
3,948,300	+		RR42_RS18215	0.89	-0.4
3,948,300	+		RR42_RS18215	0.89	-2.3
3,948,300	+		RR42_RS18215	0.89	+0.2
3,948,301	-		RR42_RS18215	0.89	-1.9
3,948,301	-		RR42_RS18215	0.89	+0.8
3,948,353	+				-0.7
3,948,353	+				-0.9
3,948,556	+		RR42_RS18220	0.12	+1.3
3,948,694	+		RR42_RS18220	0.26	-2.1
3,948,694	+		RR42_RS18220	0.26	-1.5
3,948,694	+		RR42_RS18220	0.26	+2.2
3,948,694	+		RR42_RS18220	0.26	-0.5
3,948,695	-		RR42_RS18220	0.27	+0.6
3,948,695	-		RR42_RS18220	0.27	+0.1
3,948,695	-		RR42_RS18220	0.27	+0.5
3,948,695	-		RR42_RS18220	0.27	+0.5
3,948,695	-		RR42_RS18220	0.27	-1.0
3,948,695	-		RR42_RS18220	0.27	+0.7
3,948,695	-		RR42_RS18220	0.27	+1.6
3,948,695	-		RR42_RS18220	0.27	-0.3
3,948,695	-		RR42_RS18220	0.27	+0.5
3,948,695	-		RR42_RS18220	0.27	+0.7
3,948,709	+		RR42_RS18220	0.28	+0.9
3,948,709	+		RR42_RS18220	0.28	+0.3
3,948,710	-		RR42_RS18220	0.28	+0.4
3,948,710	-		RR42_RS18220	0.28	+1.8
3,948,748	+		RR42_RS18220	0.32	+0.3
3,948,748	+		RR42_RS18220	0.32	-0.4
3,948,915	+		RR42_RS18220	0.50	+0.1
3,948,915	+		RR42_RS18220	0.50	+0.2
3,948,915	+		RR42_RS18220	0.50	-0.7
3,948,916	-		RR42_RS18220	0.50	-0.1
3,948,916	-		RR42_RS18220	0.50	-1.7
3,948,916	-		RR42_RS18220	0.50	-3.0
3,948,916	-		RR42_RS18220	0.50	+0.6
3,948,916	-		RR42_RS18220	0.50	+1.6
3,948,919	+		RR42_RS18220	0.50	+0.8
3,948,919	+		RR42_RS18220	0.50	+1.7
3,948,919	+		RR42_RS18220	0.50	-0.0
3,948,919	+		RR42_RS18220	0.50	-0.4
3,948,919	+		RR42_RS18220	0.50	+0.3
3,948,919	+		RR42_RS18220	0.50	-0.9
3,948,919	+		RR42_RS18220	0.50	+0.1
3,948,920	-		RR42_RS18220	0.50	+0.3
3,948,920	-		RR42_RS18220	0.50	+0.1
3,948,986	+		RR42_RS18220	0.57	+2.6
3,948,988	+		RR42_RS18220	0.57	+0.9
3,949,091	+		RR42_RS18220	0.68	+0.6
3,949,092	-		RR42_RS18220	0.68	+0.8
3,949,092	-		RR42_RS18220	0.68	-0.6
3,949,093	-		RR42_RS18220	0.68	+1.0
3,949,209	+		RR42_RS18220	0.80	-2.6
3,949,356	+				-1.5
3,949,356	+				-0.6
3,949,356	+				-1.3
3,949,372	-				-1.2