Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17745

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,836,790	+		RR42_RS17735	0.65	+1.1
3,837,279	+		RR42_RS17740	0.42	+0.7
3,837,280	-		RR42_RS17740	0.43	+0.5
3,837,390	+				-2.3
3,837,397	-				-0.5
3,837,507	-				+0.8
3,837,507	-				+0.7
3,837,507	-				+0.4
3,837,507	-				-0.8
3,837,551	-				-0.0
3,837,560	+				-1.2
3,837,636	-				+2.4
3,837,819	+		RR42_RS17745	0.40	+0.1
3,837,819	+		RR42_RS17745	0.40	+0.0
3,837,820	-		RR42_RS17745	0.40	+1.0
3,838,002	+		RR42_RS17745	0.78	-0.9
3,838,003	-		RR42_RS17745	0.78	-1.1
3,838,003	-		RR42_RS17745	0.78	-2.0
3,838,108	-				-0.2
3,838,329	-				+1.1
3,838,329	-				+2.6
3,838,568	+				+0.1
3,838,569	-				+0.0
3,838,570	+				-1.8
3,838,570	+				-0.2
3,838,571	-				-0.4
3,838,571	-				+0.1
3,838,571	-				+0.1
3,838,571	-				-1.3
3,838,571	-				-1.5
3,838,571	-				-1.0
3,838,703	+		RR42_RS17750	0.19	+0.4
3,838,793	+		RR42_RS17750	0.26	-0.1
3,838,793	+		RR42_RS17750	0.26	+0.8
3,838,793	+		RR42_RS17750	0.26	-2.9
3,838,793	+		RR42_RS17750	0.26	+1.8
3,838,793	+		RR42_RS17750	0.26	+0.0
3,838,793	+		RR42_RS17750	0.26	-0.4
3,838,794	-		RR42_RS17750	0.26	+0.5
3,838,794	-		RR42_RS17750	0.26	+0.8
3,838,794	-		RR42_RS17750	0.26	+1.9
3,838,794	-		RR42_RS17750	0.26	+0.3
3,838,794	-		RR42_RS17750	0.26	-0.5
3,838,845	+		RR42_RS17750	0.30	-1.8
3,838,846	-		RR42_RS17750	0.30	+1.3
3,838,902	-		RR42_RS17750	0.34	-0.2
3,838,902	-		RR42_RS17750	0.34	+1.1
3,838,902	-		RR42_RS17750	0.34	+0.1
3,838,902	-		RR42_RS17750	0.34	-1.2
3,838,925	+		RR42_RS17750	0.36	+0.9
3,838,926	-		RR42_RS17750	0.36	+0.7
3,838,928	+		RR42_RS17750	0.36	+1.3
3,838,928	+		RR42_RS17750	0.36	+0.1
3,838,928	+		RR42_RS17750	0.36	+0.5
3,838,928	+		RR42_RS17750	0.36	+0.5
3,838,928	+		RR42_RS17750	0.36	+0.7
3,838,929	-		RR42_RS17750	0.36	-3.3
3,838,987	+				-0.9
3,839,026	+		RR42_RS17750	0.44	-2.7
3,839,026	+		RR42_RS17750	0.44	+0.2
3,839,026	+		RR42_RS17750	0.44	+0.3
3,839,027	-		RR42_RS17750	0.44	+0.4
3,839,027	-		RR42_RS17750	0.44	+1.0
3,839,027	-		RR42_RS17750	0.44	+0.4
3,839,027	-		RR42_RS17750	0.44	+1.0
3,839,027	-		RR42_RS17750	0.44	+0.1
3,839,082	-		RR42_RS17750	0.48	+0.3
3,839,084	+		RR42_RS17750	0.48	+1.6
3,839,084	+		RR42_RS17750	0.48	+0.9
3,839,085	-		RR42_RS17750	0.48	+0.0
3,839,085	-		RR42_RS17750	0.48	+0.6
3,839,085	-		RR42_RS17750	0.48	+1.1
3,839,085	-		RR42_RS17750	0.48	+1.1
3,839,085	-		RR42_RS17750	0.48	-1.1
3,839,085	-		RR42_RS17750	0.48	+0.8
3,839,085	-		RR42_RS17750	0.48	+0.7