Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17510

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,788,346	+		RR42_RS17505	0.57	-0.5
3,788,346	+		RR42_RS17505	0.57	-0.9
3,788,346	+		RR42_RS17505	0.57	+0.8
3,788,347	-		RR42_RS17505	0.57	-1.1
3,788,347	-		RR42_RS17505	0.57	-1.2
3,788,347	-		RR42_RS17505	0.57	-1.2
3,788,347	-		RR42_RS17505	0.57	-1.2
3,788,604	+		RR42_RS17505	0.75	-1.0
3,788,605	-		RR42_RS17505	0.75	-0.9
3,788,605	-		RR42_RS17505	0.75	-1.4
3,788,605	-		RR42_RS17505	0.75	-1.0
3,788,676	+		RR42_RS17505	0.80	+0.4
3,788,823	+		RR42_RS17505	0.90	-0.2
3,788,823	+		RR42_RS17505	0.90	-1.2
3,788,824	-		RR42_RS17505	0.90	-0.7
3,788,824	-		RR42_RS17505	0.90	-0.6
3,788,824	-		RR42_RS17505	0.90	-1.2
3,788,824	-		RR42_RS17505	0.90	-2.2
3,788,824	-		RR42_RS17505	0.90	-1.5
3,788,824	-		RR42_RS17505	0.90	+0.9
3,788,898	+				-0.2
3,788,899	-				-2.5
3,788,899	-				-1.2
3,788,971	-				-1.0
3,788,971	-				+0.4
3,788,971	-				-1.6
3,788,971	-				-2.8
3,788,971	-				+0.5
3,788,971	-				-1.9
3,789,091	-				-0.5
3,789,091	-				-0.8
3,789,091	-				+0.9
3,789,091	-				+0.8
3,789,091	-				+0.7
3,789,091	-				-2.1
3,789,092	+				+2.0
3,789,092	+				+1.1
3,789,092	+				+0.6
3,789,092	+				-0.7
3,789,093	-				-2.9
3,789,093	-				-0.2
3,789,093	-				+0.8
3,789,150	-				-0.8
3,789,341	+				-3.0
3,789,341	+				-1.1
3,789,442	-		RR42_RS17510	0.17	+1.1
3,789,442	-		RR42_RS17510	0.17	-2.6
3,789,561	+		RR42_RS17510	0.28	+0.5
3,789,561	+		RR42_RS17510	0.28	-2.2
3,789,735	+		RR42_RS17510	0.45	-0.0
3,789,758	+		RR42_RS17510	0.47	+0.4
3,789,758	+		RR42_RS17510	0.47	-0.4
3,789,759	-		RR42_RS17510	0.47	+0.2
3,789,759	-		RR42_RS17510	0.47	-0.3
3,789,759	-		RR42_RS17510	0.47	-0.9
3,789,804	+		RR42_RS17510	0.51	-0.3
3,789,928	-		RR42_RS17510	0.63	+0.7
3,789,928	-		RR42_RS17510	0.63	+0.2
3,789,930	+		RR42_RS17510	0.63	+0.4
3,789,930	+		RR42_RS17510	0.63	+0.0
3,789,930	+		RR42_RS17510	0.63	+0.2
3,789,930	+		RR42_RS17510	0.63	-0.6
3,789,930	+		RR42_RS17510	0.63	-1.7
3,789,930	+		RR42_RS17510	0.63	+0.1
3,789,931	-		RR42_RS17510	0.63	-0.4
3,789,931	-		RR42_RS17510	0.63	-0.1
3,789,936	+		RR42_RS17510	0.64	+1.8
3,790,045	-		RR42_RS17510	0.74	-2.6
3,790,122	+		RR42_RS17510	0.82	-0.7
3,790,122	+		RR42_RS17510	0.82	+1.4
3,790,123	-		RR42_RS17510	0.82	+0.9
3,790,152	+		RR42_RS17510	0.85	-0.2
3,790,153	-		RR42_RS17510	0.85	-0.9
3,790,153	-		RR42_RS17510	0.85	+0.5
3,790,153	-		RR42_RS17510	0.85	-2.7
3,790,153	-		RR42_RS17510	0.85	-1.7
3,790,191	+		RR42_RS17510	0.88	-0.9
3,790,192	-		RR42_RS17510	0.88	+0.6
3,790,225	+				+0.1
3,790,225	+				+1.7
3,790,226	-				-0.9
3,790,226	-				-0.7
3,790,226	-				+0.1
3,790,226	-				-2.0
3,790,442	+				-1.9
3,790,442	+				-0.7
3,790,443	-				+0.1
3,790,656	-		RR42_RS17515	0.23	-0.3
3,790,656	-		RR42_RS17515	0.23	+0.5
3,790,797	+		RR42_RS17515	0.35	-0.9
3,790,798	-		RR42_RS17515	0.35	+0.2
3,791,009	-		RR42_RS17515	0.51	+0.5
3,791,010	-		RR42_RS17515	0.51	+1.4
3,791,181	-		RR42_RS17515	0.65	-0.7
3,791,266	-		RR42_RS17515	0.71	-0.9