Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17255
Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM |
---|---|---|---|---|---|
remove | |||||
3,733,993 | + | -0.7 | |||
3,735,089 | + | RR42_RS17255 | 0.20 | +0.7 | |
3,735,090 | - | RR42_RS17255 | 0.20 | +1.0 | |
3,735,090 | - | RR42_RS17255 | 0.20 | -0.8 | |
3,735,188 | + | RR42_RS17255 | 0.34 | -0.4 | |
3,735,238 | + | RR42_RS17255 | 0.41 | +1.0 | |
3,735,485 | - | RR42_RS17255 | 0.77 | -1.7 | |
3,735,556 | + | RR42_RS17255 | 0.87 | +0.4 | |
3,735,557 | - | RR42_RS17255 | 0.87 | +1.4 | |
3,735,741 | - | +1.8 | |||
3,735,763 | - | +0.4 | |||
3,735,961 | + | RR42_RS17260 | 0.39 | -2.2 | |
3,735,961 | + | RR42_RS17260 | 0.39 | +0.7 | |
3,736,015 | + | RR42_RS17260 | 0.47 | +1.5 | |
3,736,015 | + | RR42_RS17260 | 0.47 | +1.0 | |
3,736,411 | + | -2.4 | |||
3,736,411 | + | -0.9 | |||
3,736,411 | + | +0.3 | |||
3,736,412 | - | -0.8 | |||
3,736,441 | + | -1.9 | |||
3,736,442 | - | +0.7 | |||
3,736,442 | - | +1.1 | |||
3,736,505 | + | +1.2 | |||
3,736,506 | - | +0.7 | |||
3,736,522 | + | -0.2 | |||
3,736,522 | + | -1.4 | |||
3,736,522 | + | +0.1 | |||
3,736,523 | - | +0.4 |
Or see this region's nucleotide sequence